Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000028_08253171_08253926 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000028 |
| NCBI id | null |
| chromosome length | 9874160 |
| location | 8252965 ~ 8254461 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107381066 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000028_08253171_08253926.mRNA | False | 1137 | mRNA | 0.40 | 3 | 8252965 | 8254461 |
| TU170422 | True | 438 | lncRNA | 0.41 | 2 | 8253831 | 8254413 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000028_08209464_08209781 | NA | coding | downstream | 43184 | 8207732 ~ 8209781 (-) |
| CI01000028_07885954_07890507 | NA | coding | downstream | 362458 | 7884624 ~ 7890507 (-) |
| CI01000028_07643341_07644823 | NA | coding | downstream | 607549 | 7642217 ~ 7645416 (-) |
| CI01000028_07632826_07637377 | ONECUT1 | coding | downstream | 614798 | 7632607 ~ 7638167 (-) |
| CI01000028_07627976_07631457 | NA | coding | downstream | 621426 | 7627772 ~ 7631539 (-) |
| CI01000028_08523322_08527676 | NA | coding | upstream | 268732 | 8523193 ~ 8527676 (-) |
| CI01000028_08574189_08576449 | NA | coding | upstream | 319584 | 8574045 ~ 8576449 (-) |
| CI01000028_08578132_08578857 | NA | coding | upstream | 323597 | 8578058 ~ 8580112 (-) |
| CI01000028_08696023_08698981 | ZBED9 | coding | upstream | 441356 | 8695817 ~ 8699183 (-) |
| CI01000028_08823968_08838447 | NA | coding | upstream | 569017 | 8823478 ~ 8839766 (-) |
| G150055 | NA | non-coding | downstream | 1807 | 8250920 ~ 8251158 (-) |
| G150051 | NA | non-coding | downstream | 7173 | 8245491 ~ 8245792 (-) |
| G150045 | NA | non-coding | downstream | 15391 | 8236833 ~ 8237574 (-) |
| G150035 | NA | non-coding | downstream | 27751 | 8224937 ~ 8225214 (-) |
| G150036 | NA | non-coding | downstream | 29040 | 8223705 ~ 8223925 (-) |
| G150180 | NA | non-coding | upstream | 65355 | 8319816 ~ 8334613 (-) |
| G150191 | NA | non-coding | upstream | 82229 | 8336690 ~ 8399946 (-) |
| G150223 | NA | non-coding | upstream | 149359 | 8403820 ~ 8404307 (-) |
| G150233 | NA | non-coding | upstream | 162091 | 8416552 ~ 8417009 (-) |
| G150253 | NA | non-coding | upstream | 209107 | 8463568 ~ 8468515 (-) |
| G149923 | NA | other | downstream | 228721 | 7974568 ~ 8024244 (-) |
| CI01000028_07527725_07535631 | ARPP19 | other | downstream | 717222 | 7525962 ~ 7535743 (-) |
| G149474 | NA | other | downstream | 1020182 | 7229791 ~ 7232783 (-) |
| CI01000028_06969947_06983352 | NA | other | downstream | 1281068 | 6965064 ~ 6984084 (-) |
| G149329 | NA | other | downstream | 1551725 | 6699513 ~ 6701240 (-) |
| G150328 | NA | other | upstream | 438937 | 8693398 ~ 8693743 (-) |
| CI01000028_09469357_09494746 | NA | other | upstream | 1222384 | 9469343 ~ 9494746 (-) |
