CI01000028_08523322_08527676


Basic Information

Item Value
gene id CI01000028_08523322_08527676
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 8523193 ~ 8527676 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_08523322_08527676.mRNA
ATTTTTAAATCTAACCATGTTCCAATTAACAGATTTTATTGCGAATCCATGCAAGTGGAGTTGTTTCAAATTAATAGAACTGATCTTATGAAAATTGCCACTTATTATAAGGGCGTCTTTGGTGATGAGGAAAAGCTGGTAAACTATCCCGAATCAGTTGAGGGTAGTTCAGAGGATCTTGCGCTGCAAGTTAAGAAGTTGGACCTGCAAGCTGCAAGAAAAGCCCAGGAAGCATATTCTTCATTATCAGTGGAAGAGTCTCTTGATTGTGACCAAGTTAAAGCAGCTGTTCTTAGAGTTTATGAACTGGTTCCTGAGGCATATTGCCAAAAATTCCGTAATCACCGAAAAACTGATGAAACTTACGTTGAATTCATTCGAGAGAAAAATTTCCATCTGTTAGCAACAGTCATCGGTTCAAGCGTAATTTTGATCACGCTCCTCCTGATGTTAAAGTCGCGAAGAGTTCTGTCAAGTCTCTGTCCTCACCTGTTTGTTTCTATTGTAGGAAACGTGGACACATTATTTTTTAAAAAGAAAAACTGTGTCCCTAAACCAGTGGGTTTATTGATGATGTCCTCACCACAGTTGGAAGGACTGGAGTTGTTAGCTTCTCAAGCTGACATGTGTGAAGATCAGGGGATACTCCGTGATACAGGAGCTGCTCAAAGTTTTATTCTGGAAGGAATATTGCCATTGTCTGAGGAAAGCTCTATTGGTTCGAGTGTTTTGGTACAGGGATTCGAGATGGGCTTTGTGAATGTGCCATTGCACGAAATTGAAATTGAGTCCTTCCTTGTTACTGGCCGCATCGTTGTCGGAGTGCGACAATGTCTTCCCATTCGAGATGTCACATTTATTTTAGGGAACGACTTGGCGGGAGGAAAAGTTTTTGCCAGCCCTGATGTAATTGATGTTCCTCTTCCCTGTTCTACTCCTGATGAATTGGCTCAGAAATACCCAGAGGTATTTCCTTCTTGCTCTGTTACTCGCGCTATGTCTCAGAGACTGAAAGATGAGAACCATGCCATTGGTGAACCATTTGAGCGTGTATTGGTTGACTGTGTCAGTCCCTTGCCTCGTACGAAGTCTGGTAATCAGTACCTCTTAACGATCATGTGCACATTAACGAGTTTTCCAGAGGCAATTCCTCTGCGAAAAATAATAGCATCAGTGATTGTAAAGTCACTTATCAAATTATTTTCGTTGTTTGGCCTTCCGCGTACCATTCAATCAGATCAAGGTACAAATTTTATGTCTCGTGTGTTTAAACAGGCTCTGGATCAGTTGCATATTCAACACTGCACTTCTAGTTGTTACCACCCCGAAAGTCAGGGAGCACTCGAAAGGTTCCACCAGACTTTGAAATCTATGCTACATGTGTTTTGTCTGGAGTTCCAAAAAGACTGGGATGAACGAGTGCCTATGGTTATGTTTACAGTGAGGGAGGTAGTGCAGGAGTCGTTGGACTTTAGTCCGGCCGAGTTAGTGTTCGGACATACTGTCCGTGGCCCACTAAAGCTGATCAAAGACCACTGGTCTAATGATTCGAGTCCAAATAATGTTCTTGACTATGTTTCAGAGTTTCGTTTTAAATTGCACCGTGCATGTGAGTTGGCCAAACAGAATTTGGAGATGTCACAACAACGAATGAAAAAACGTTTTGATCGTGGTACTAAACTTTGTAGTTTCTCTCCCGGTGATAAGGTATTAGTGCTTTTGCCAGTACCTGGATCAGCAGTACAGGCTCGTTACTATGGTCCTTACCAGGTGAAGGAAAAGGTGAGTGAGCTTGACTATGTGATTATGACACCTGATAGAAAGAAGAAAACTTGTCTGTGTCATGTTAACATGCTCAAGCTGTACTTTGAGAGGCAGCCAGATTCGTCTGGACAGAAGTCGGCTTTGTTAATTGCTTCTCTCACAGATTCTCTGGTGATCAAAGAGCAGGCGCTGTCCAGTGCTGATTTACCTGCTGATGGGGCGCTGTCCAGTGCTGAACTTTTGACCTGTCCATTGCCCTCCGCAGTTCCTGATAACGCTGCTGCTTTGTCTACACTTGAGGAGGAGGATGATGTTGATTTTTCCCTCTACAGAACTGAACATGATGCCGATGTTGGCAATTCTTTGCCCATTAAACAGCATGCATACCGGTTAAGTCCTGAGAAGCGATCTAAGCTGCAAAAAGAGGTTACCTTCATGCTTGAAAATAACATCGCAGAGTCAAGTGTTAGAGTTAAGCCTGTGACAAAACCAGATAGTTATCCATTGCCTCGTATGGAAGACTGCGTGGATCGCGTTGGAAATGCTGCTTTCGTTACCAAAATCGATCTGCTTAAAGGTTACTGGCAGGTGCCTTTGTCAGATCGCACGAAAGAGATCAGTGCGTTCGTAACACCAGACCATTTCCTACATTGCACCGTAATGGCTTTCGGTTTACGAAACGCACCGGCAACTTTTCAGAGTTTTTACTTGCTGTTGATGCAAGTGACATGGAAGCAGGTGCTGTACTTCTCCAACGAGGCCAAGCTGGCGTTGAGCATCCCCTATTTCTCGCGCAAATTTAATAAACATCAGCGGGGTTACTCCACCACTGAGAAGGAGGCGCTTGCACTTGTCCTTGCTCTTCTACATTTTGATGTTTACATTGGTTCTGTTTCATATCCTTTGATTGTCTACACAGATCATAATTTCCTTAGTTTTCCTTAATCGAATGAAGAATAACAACCAACGTCTGATGCGCTGGAGTTTGTTTTTACAGACTCTTGAGTTGGAAATTCGACACATTCACGGTAAGGATAACTGCTGACGCTTTATCCCACATTTGAGTGGAATAAA

Function

NR:

description
LReO_3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_08523322_08527676.mRNA True 2838 mRNA 0.43 8 8523193 8527676

Neighbor

gene id symbol gene type direction distance location
CI01000028_08253171_08253926 NA coding downstream 268732 8252965 ~ 8254461 (-)
CI01000028_08209464_08209781 NA coding downstream 313412 8207732 ~ 8209781 (-)
CI01000028_07885954_07890507 NA coding downstream 632686 7884624 ~ 7890507 (-)
CI01000028_07643341_07644823 NA coding downstream 877777 7642217 ~ 7645416 (-)
CI01000028_07632826_07637377 ONECUT1 coding downstream 885026 7632607 ~ 7638167 (-)
CI01000028_08574189_08576449 NA coding upstream 46369 8574045 ~ 8576449 (-)
CI01000028_08578132_08578857 NA coding upstream 50382 8578058 ~ 8580112 (-)
CI01000028_08696023_08698981 ZBED9 coding upstream 168141 8695817 ~ 8699183 (-)
CI01000028_08823968_08838447 NA coding upstream 295802 8823478 ~ 8839766 (-)
CI01000028_08879941_08885561 NA coding upstream 352165 8879841 ~ 8885703 (-)
G150253 NA non-coding downstream 54678 8463568 ~ 8468515 (-)
G150233 NA non-coding downstream 106184 8416552 ~ 8417009 (-)
G150223 NA non-coding downstream 118886 8403820 ~ 8404307 (-)
G150191 NA non-coding downstream 123247 8336690 ~ 8399946 (-)
G150180 NA non-coding downstream 188580 8319816 ~ 8334613 (-)
G150281 NA non-coding upstream 54877 8582553 ~ 8616998 (-)
G150304 NA non-coding upstream 110164 8637840 ~ 8638112 (-)
G150307 NA non-coding upstream 119410 8647086 ~ 8647288 (-)
G150313 NA non-coding upstream 124986 8652662 ~ 8653073 (-)
G150316 NA non-coding upstream 126599 8654275 ~ 8656615 (-)
G149923 NA other downstream 498949 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 987450 7525962 ~ 7535743 (-)
G149474 NA other downstream 1290410 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 1551296 6965064 ~ 6984084 (-)
G149329 NA other downstream 1821953 6699513 ~ 6701240 (-)
G150328 NA other upstream 165722 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 949169 9469343 ~ 9494746 (-)

Expression


Co-expression Network