G149480


Basic Information

Item Value
gene id G149480
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 7170936 ~ 7228043 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU169782
GGGCCCACACTGAAACGGCGCGTTTTTGCTCAACCACTAAAAGTGGCAATTTTAACATGCTATAAAAAATTATCCACATATTTTTCATATTTAGAGTGTACGCTTTCACTGCGTGATTTAGTCTATTAAAATGCATTTAGAATGCCCACAGAATTCAAAATAAGGGGAAAAAATGACCCTGTATGTCTTTTATATTTATATAATTTAATATAATTAACCAATATTAAACAAAGAGCGCCATTTTTCTCCAAATATCAGCATGATTACAAATGTGATATTGATTTTATACAACTTACAGTTTAAAGAACAAGAACTTAATATCAAGTGACTTACATTTTAGACACCAAATCGCCTGTTTTGCTCTATTTCGCCTACGGAAATAGTTCCAAAGTTCACACAGAATTGTTTTGCGTCTCTGAGCAACACTTCCTGAATGAATCAGCCATTTGAATGAATCGGTTGAATCTCAATGACTCGCTCATTAACAGGGACTTGCTGCCACCTACTGGCGGGTTTAATTTCACGTTTAAAGTGTCTTTTCATTTTTAAAATAATTTCAAATAACAGTATTTAACGTTTTATATTTTCAACATTTCAAAACATTATTTATGCATCTGTAACTGCTCTTGACTGATAAACTTTAATAAATATTTATCTAATATTTAATCTATTAGCTATACATTAGATTACAATTTCTGTACCTGAAAATCTCCTGTTTAAACCTACATGGAAAAACTTGAAAAGGACCGTTTATTTCATTTATATGTTTGTTCTGTTGTATTTATTTTTGCTATTACTCATAATTTGATTATTTGTTACTATTGTATTACTTACTGTTTATTTGTCTAACAATATTTAAAATTTAAGTGAGTAGCTTTTGGTGTCATAACCCTATTTATTAAGGTTACATGTATAAAAAACAACAAAAACAATAACTAGGCTTTTTTTATAAGCCCATTTCTTTTCTTTTACTTTATTAATTTTTTGTCGTGGGGCAAGTGAAAATTTTGGCGGGGCAAGTAAAAATTTGAACCACTTGCCCAACTGGGCCTGTAGAAAAAATCCTTAGCGTTGAGCCCTGACTGTAGAGTTGACACTTGGACTGGAGTAAACTCAAAAACAAGCTCATTGGCTGGCGCAGGTTCTAGAGTAAACTCAAAAACAAAAGTGGGCTCAAAAACAAAATCTTGAACTGGAGCAGGCTTAGAAACAGACTCTTGGGTTGGCGCGAGCTCTGGAGTGAATTTTTGGACTGAAGCAGGCTCTCTAACCAAATCTTGAACTGGAGCAGGCTCTGAAATAGACTCTTGAGCTAGAGCAGACTATGAAACAAACCTTTGGACTAGAACAGGCTCTGGAGTAGAGTTTTGGGCTTGAGCAAGCTCTAAAGTGGATTCTTGGACTGGAGTGGGCTCTAAAACGTAATATTGAACTGGAGCGGGCTCAAAAACAGACTCTAGGGCTAGAGTGAGCTCTGAAACAGACTCTTGGGCAGGAGCAGGCTCTGGAGTGGAGTCTTGGGCTGTAGCGGGCTCTGAAACAGAATCTTGGGCTGTAGCGGGCTCTGAAACAGAATCTTGGGCTGTAGCGGGCTCTGAAACAGATTCTTTGGCTTGGGACAAATGCAGAAACAAACACAACTTAAATAGACAGACAAACGATACAAATGAGCACCAGCTGAGGGCAATCAGCCCAGATGAGAACGGTGCAAAGGGACTCTGGTAATAGAGCTCATGGCAGAGACACAGTGGAAGGGAAGAGCACTCTCTAGTGGACAGACAGGAAAATACAACTAGATACAGAGACACTGGGAAATAGAGTTCATAGCAGTGTCGCTGTGCAAGGGGAAGGACTTCCCTCTGTGGACAACTAGGGCACAACAGCTAGACTGTGAGTTTTCACTGTGCCACCCGAACACTACACTATTTTAGCCCTGAATTTTCCGCATTCACTATGTTTGAATGATCAAAAACTCGATTTGAGAAAAGCACAGATACTGTACATCTCTGTACTCCAAGAGATATTTAGTATGTTAAACATCTAGGCCTGTCTGTGATTCAAGTACTGTAATGTGAAATGTGTTTTCACTGGAAGTGACATCGGAGACGACAGGCAGTTGTGTACCGTGAAAAGAACAAAAGTCATGTAGTGTATGGCAGCAGCAGGACAAAAGGTCACAGTATGTGACTTCTCTGTAGCCCAACAGTTAGACAAGACAGATAGATCAAACAACAGACAGATAGTCCCATTAATTATATCAGAAGTAAGTCATGCAGATGCAAACATTGCTTTTCCCCATCAGTATTAATGCACCAATTTCTGTTCTTACCGCTTTCTCTGTTCTCTCTGCTTCTGTTGGTACAGTGTCATGATTTTTGTGTTTATCCATCGTACACAGTGTACAAATACAGTGCTGGTCAGTGCGACAGAAAACCTCTAGCAGTCTACCATGTTGAGAGCAGATCATCTCCTGGAGTCGTCCAGTGGCATCCATCAAATAATGTCTCTTACCTTTAAACAAATTCTCATGCTGTTCAAGGTGGTTTTGACAGTAAGAGTTCAGACACATCAGACAGGACTTGATGGCTTTGTGTTTTCTTCCAGTACAGACATCACACATTACATCTCCAAGTCCAGTGTCAACAGAAACTGCAGCTTGTAGTTTAGTCTTCTTCAGTTTCTCCACCACTTCAGCCAGCATGGTGTTTTTATTTAAAGCAGGTCTTGGAGCGAAGGTCTGTCTGCACTGTGGGCAGATGTGGACTGTCTTCTGATCCTGATGATTCCAGCAGTCCGTAATACATGTTATACAGTAATTGTGTCCACAGGGAATGGTCACTGGATCCTTCAGGAGATCTAGACACACTTGACAGATGAACTGTTCCCGAGCCCATAAAACACTGGCCTCTGCCATTTTATTGCATGTGAACACAGAAACAGAAGCACAAACAGCAGCTCCACAAGTTTTGGTATCTCAGAACTAAAGAACTGAAACGGTTTTCCTGGTTATTTGCTTGTGTGCGGTGTGCAAAAAGGTGTGTCTGTAAGCTGTGACTCACCTGTTATTTAATGCACATTCTCAAATTTAAAGTGTCCTCCTCACAGAAAACATTACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169782 True 3118 lncRNA 0.39 2 7170936 7228043

Neighbor

gene id symbol gene type direction distance location
CI01000028_07148224_07150338 NA coding downstream 20444 7147894 ~ 7150492 (-)
CI01000028_07124749_07145384 NA coding downstream 23827 7122715 ~ 7147109 (-)
CI01000028_07102169_07103695 NA coding downstream 67219 7102127 ~ 7103717 (-)
CI01000028_07010842_07012858 NA coding downstream 158078 7009823 ~ 7012858 (-)
CI01000028_06969947_06983352 NA coding downstream 186852 6965064 ~ 6984084 (-)
CI01000028_07236259_07242539 NA coding upstream 8156 7236199 ~ 7242940 (-)
CI01000028_07257403_07298334 NA coding upstream 29134 7257177 ~ 7298334 (-)
CI01000028_07328793_07405548 MYO5A, MYO5AA coding upstream 100279 7328322 ~ 7406679 (-)
CI01000028_07424181_07428224 NA coding upstream 195922 7423965 ~ 7428549 (-)
CI01000028_07527725_07535631 ARPP19 coding upstream 298107 7525962 ~ 7535743 (-)
G149554 NA non-coding downstream 54627 7076989 ~ 7116309 (-)
G149567 NA non-coding downstream 58511 7105656 ~ 7112425 (-)
G149535 NA non-coding downstream 117472 6992080 ~ 7053464 (-)
G149528 NA non-coding downstream 216329 6954397 ~ 6954607 (-)
G149632 NA non-coding upstream 24751 7252794 ~ 7253110 (-)
G149637 NA non-coding upstream 65549 7293592 ~ 7293796 (-)
G149467 NA non-coding upstream 96757 7324800 ~ 7326970 (-)
G149657 NA non-coding upstream 143994 7372037 ~ 7373033 (-)
G149329 NA other downstream 469696 6699513 ~ 6701240 (-)
CI01000028_02441408_02445596 RPL35A, GM10247 other downstream 4724623 2441332 ~ 2445596 (-)
G146238 NA other downstream 5010898 2147378 ~ 2160038 (-)
G146190 NA other downstream 5059671 2097570 ~ 2111265 (-)
G149474 NA other upstream 1748 7229791 ~ 7232783 (-)
G149923 NA other upstream 746525 7974568 ~ 8024244 (-)
G150328 NA other upstream 1465355 8693398 ~ 8693743 (-)
CI01000028_09469357_09494746 NA other upstream 2248802 9469343 ~ 9494746 (-)

Expression


Co-expression Network