CI01000029_01851039_01859542


Basic Information

Item Value
gene id CI01000029_01851039_01859542
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 1851039 ~ 1859988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_01851039_01859542.mRNA
AGAGGATTATACTCTGGTGGAAAGAGGTGGCATCTGTCGGCTTACCAAACATTAGCCGTTTGGAAAATAGTTTCTGCACTTTTCATGATGCACGACACCCAGATAGCGAGTATACTATTAGCAAACATGATTTACTCCAATTTGCCTACTCAATAGTCAACTCTTATGTTTTATGGACACCCTATAGCAGCAGCATCAATACATCTTACTCAGCCCCTTTTCTCTTTTTCATTTTTATCCATTTTCACTTTAGAGTACCATTTAGGAAGCAAAATGTTTTCAAAGGATCCACCCCTTCAGACTGCAGTGAACTGATTATCAGCGCTCGCCTCTCAAGGCTTCCCCTTGGCAACGGGACTCCACCGCGGAGCTGGAAGGTTGCCAGACTTCTAACTATTAGGGAATTTAATGCTCTACAAGAAGAAGATGGATTGTTGGTCGGCCATTTTGGTGCTCAAATGCTTGTGGTCAACAGCGAATGTCTGGAGTATAAAGAAGGCCTGGATATTGATTTCCTAACATCTTTACACATTGGCATTGCACTAGGATTCTGGCTGCATCTGCAGGCTTCCAGTTAATAACTGTGAAAAGGGCAAGAATAGAGAAGAGACAGAGAGAGATTTTGTTGATTCTGTGCCAGGATGAATTTGCCAGATGTGTCTCATCACAAGACAGGTGTCCATGGCTGATAGAACAGGTGCATTATGATGTTTGGCGTCATAGTTTGATATTATGGTTTCTGAAAAGGCCTCTCTGTTTTCCATCAATACTCAAAAAGCAAAGGCCCAAGCTCTCATCAGCAGAATTTTAAACATGTGGACGTTGAATTTTTAATCACCAGACAGTATTTCTGACCTTTGAGGATGGATCCAAATTGAATATCTCTTCACGGTTCTGTGTGCCATTTCTGATTTGTTTTATGAAGTAGAATTTTTTTCTTTTTTTTTTTGCCACCAGCATCTCAGAACAGCTGCTTGGGCAATTGCAAAATGCCAGTTGGAAACTCTCCATTGCTTTTTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_01851039_01859542.mRNA True 1024 mRNA 0.41 5 1851039 1859988

Neighbor

gene id symbol gene type direction distance location
CI01000029_01815422_01845569 IFT172 coding upstream 5127 1815422 ~ 1845912 (+)
CI01000029_01751220_01751657 NA coding upstream 98403 1750971 ~ 1752636 (+)
CI01000029_01699880_01719696 UCKL1.L, UCKL1 coding upstream 129550 1699666 ~ 1721489 (+)
CI01000029_01662550_01681291 NA coding upstream 168949 1662550 ~ 1682090 (+)
CI01000029_01653157_01657944 NA coding upstream 193034 1652840 ~ 1658005 (+)
CI01000029_01868364_01875110 NA coding downstream 8172 1868160 ~ 1876032 (+)
CI01000029_01894962_01930271 MSRA coding downstream 34974 1894962 ~ 1930271 (+)
CI01000029_01941376_01941659 NA coding downstream 81388 1941376 ~ 1942520 (+)
CI01000029_02037027_02050337 REPS1 coding downstream 177039 2037027 ~ 2050410 (+)
CI01000029_02069731_02079236 SCARA3 coding downstream 209305 2069293 ~ 2079256 (+)
G152080 NA non-coding upstream 49522 1797095 ~ 1801517 (+)
G152099 NA non-coding upstream 151999 1698752 ~ 1699040 (+)
G152075 NA non-coding upstream 155138 1695650 ~ 1695901 (+)
G152072 NA non-coding upstream 158444 1692085 ~ 1692595 (+)
G152071 NA non-coding upstream 159647 1691185 ~ 1691392 (+)
G152093 NA non-coding downstream 20640 1880628 ~ 1971841 (+)
G152096 NA non-coding downstream 46522 1906510 ~ 1909003 (+)
G152134 NA non-coding downstream 194428 2054416 ~ 2057166 (+)
G152136 NA non-coding downstream 238013 2098001 ~ 2099430 (+)
G152199 NA non-coding downstream 249605 2109593 ~ 2110032 (+)
CI01000029_01526863_01527414 NA other upstream 323140 1526754 ~ 1527899 (+)
G151495 NA other upstream 1479117 366541 ~ 371922 (+)
G151415 NA other upstream 1625794 170521 ~ 225245 (+)
G152451 NA other downstream 901606 2761594 ~ 2762939 (+)
G153475 NA other downstream 1685137 3545125 ~ 3562004 (+)
G153790 NA other downstream 2873601 4733589 ~ 4740107 (+)
G154587 NA other downstream 3411032 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 3597253 5461497 ~ 5470346 (+)

Expression


Co-expression Network