CI01000029_05285683_05294300 (TAAR15, STX7, STX7L)


Basic Information

Item Value
gene id CI01000029_05285683_05294300
gene name TAAR15, STX7, STX7L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5285584 ~ 5295240 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_05285683_05294300.mRNA
TTATATAAGCGAACTGGCAGTGAAATCATCTTTAGGGTTTTGGATCTGCAGCCATCATAAACATGGGCATTGAAGTTTAAAGCAGTGAAGAATCTCTCGATGGAATTTCTTGAGCATCACTGCTTTCCCCTCTGGAATACAAGCTGCTCTCTGGACTTTCATTTGAATTATGTCAATGTATTGTTATTCTTGTATATATCTGCAATCTCTGTGCTGACGGTGTGTGGAAACCTACTTGTCATCATCTCTATAACAGTTTTCAAGCAGCTTCACACACCAACCAACCTGCTCATCCTCTCACTGGCCGTATCTGACTTTTTGGTGGGAATTTGTGTGATGCCTGTTGAAAGCATTAGGAGCATTAACTCATGTTTTTATATGGAAAAATCACACTGTCGTATCTTTCATATGATTATGTCCATTCTTGGATCTGCGTCCCTCATCAATATCATGCTTGTGGCTATTGATCGTTATTTTGCTGTATGTGATCCGCTCCTGTATATGTCCAAAATGACAATGAGAAAAACACTGATCTTCATAAGTTTAGGATGGACTGCATCCATCTGTTATAATCTTGTACCATTGAATTTGGGAAATTCAAACCTGACAGGGATAATTGTGATCTGTCTAAGAGAATGTGCAGTGGCTGTCAGCAACTCCTGGGGTCCAGCTGACTTGATAGTGAGCTTCATTGCTCCATGTATAGTGATGTTAATTCTGTATGTAAGAATTCTCACAGTGGCCTTGAGACAAGCAAAAGCAATCTCCAACTTTGCAAAGAAAAGAGGATCTCAGAAAAACTTAAAATCACTCAGGAAATCAGAGGTGAAGGCGACAAAAACATTGAGCACAATTGTCTTTGTGTATTTCATTTGCTGGGTTCCCTGGTTTGGTGATTCTTTGATCTCCATCATGTCTGGGTCAAGCGGAGCTGATGCAAATTTGCTGGCACAGTCTATAAGTTCAAATATTCAGAGAATAACACTGCTGACTAATGAAATCCAGCAGATGATGAGACATTTTGGAACAGCACAAGACACGACTGTCCTGCGACAAACATTACAGGAGAAACAGCAGAGTGTCAATCATCTCGCTAAAGTGACAGATAAATACATGAAAGATTTCAGCTCTTTACCTGTGACCACAGAACAGCGGCAAAGAAAAATCCAACGAGAACGTCTGATAAATGAATTCTCCAATGCACTGGGCGTTTTCCAGAAAATTCAGCGAGAGGTAGCAAAGAAAGAGAAGGAGTTTGTGGCACGTGTCCGTGCGAGCTCAAGAATTTCTACTGGTGATCCAGATGATAGCACTGGAGGATTTTTGTCACCCTTTCAAAGTGATACTCAGGCTCAAACTCAGAGATATGAGGAGAACATCACAGAAGAAGATCTGCAGCTCATTCAGGAGAGAGAATCAGCAATCAGACAGCTGGAGTCGGACATCACAGGCATTAATGAAATCTTCAGAGATCTGGGCATGATGACATCATTCCGCAAGAAGATTTTCATCTTCATCATTGTTCTGGTTGTGGTGGCTGTTGTTATTGGTTTGATTGTCTACGCTTCTGTGAAAAAATGAGTGTTTGTCAACTCTATCTGAAGGCCCAATGTTTGCACTGGCATGTTTTTAATGAGTTACGAAGTTTTGTCACCAAGTGAAGCTGCCTTGACTTAAGATATTGTCATTAATGGACTCTTTAATAACAGTTCAACTCTATAAACAGCACCTTTGGTGTGCTATCCATTACAACAGGAAATTATTTCAACTCATGTTTTTAAAGCACTGTGTTACAACATTCCACAGAGACTGTATATAGAGTTTAACCTAGAAAATGATTTCAATATTGCTACTGTTAACCAATTATCATTCCACTCTGCGCATCTTCCACCCATCTGATTTGTTGTAGAAGCAAACATTCCTTATAGTAAAATGCCCTAAATATGAGATTTCAATGGCTGAAAATATCAGTCAGTATAAAGCTGCTGCTTTAAAGAAGTACAGTATAAGAGCACTATACTTTTAAACTGCTCTCAAACACTTTATTTGAAGAAAGACTCTGAGAATACACTGCAGGTCAAAACATTAGACACTAGAATCCATTTCTCATCATCCATAGTGAGCAAATCTGGAGTGTAGACAAAAAAGGAGTGTAAGAAAGTTTTCTTTAGTTGAACATTATGAACACTACATAATTCCCATATTTCCATTTGTTGTTTCATAGTTATAATGACCTTACTATTAATCTAAAATGTATAAAATAGTAATAAAGATTGAGTAGATGTGCCTAAACTTTTGACTGGTAAGGTCAGATTCACTCAGGTCCAAAAACTATATACGTAATATAAATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATATATATATATATATATATATATATATATATAAGGCTATCGATTTAATGTGTTAATTTAATTAATTATGGGA

Function

symbol description
taar15 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in olfactory epithelium and olfactory receptor cell.
stx7l Predicted to enable SNAP receptor activity and SNARE binding activity. Predicted to be involved in intracellular protein transport; vesicle docking; and vesicle fusion. Predicted to act upstream of or within vesicle-mediated transport. Predicted to be located in membrane. Predicted to be part of SNARE complex. Predicted to be active in synaptic vesicle. Predicted to be integral component of membrane. Orthologous to human STX7 (syntaxin 7).
stx7 Enables chloride channel inhibitor activity and syntaxin binding activity. Involved in several processes, including positive regulation of T cell mediated cytotoxicity; positive regulation of receptor localization to synapse; and regulation of protein localization to plasma membrane. Located in cytoplasmic vesicle; immunological synapse; and perinuclear region of cytoplasm.

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08488 STX7; syntaxin 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_05285683_05294300.mRNA True 2521 mRNA 0.36 9 5285584 5295240

Neighbor

gene id symbol gene type direction distance location
CI01000029_05283234_05284259 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding upstream 784 5283165 ~ 5284800 (+)
CI01000029_05274996_05279739 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding upstream 5814 5274824 ~ 5279770 (+)
CI01000029_05267765_05268790 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding upstream 16700 5267690 ~ 5268884 (+)
CI01000029_05232703_05233677 TAAR11 coding upstream 51514 5230192 ~ 5234070 (+)
CI01000029_05104260_05107686 BMP2B coding upstream 177780 5103219 ~ 5107804 (+)
CI01000029_05301816_05302796 TAAR14L coding downstream 6411 5301651 ~ 5302893 (+)
CI01000029_05310130_05311110 TAAR14J, TAAR14H, TAAR14I, TAAR14L, TAAR14E coding downstream 14726 5309966 ~ 5311284 (+)
CI01000029_05313679_05325092 TAAR14L, TAAR14E coding downstream 18234 5313474 ~ 5325183 (+)
CI01000029_05338779_05339759 TAAR14B, TAAR14F, TAAR14G, TAAR14D, TAAR14E, TAAR14J, TAAR14H, TAAR14I, TAAR14L coding downstream 43330 5338570 ~ 5339911 (+)
CI01000029_05341656_05353379 FLVCR2B, FLVCR2 coding downstream 45589 5340829 ~ 5353379 (+)
G154586 NA non-coding upstream 15204 5270132 ~ 5270380 (+)
G154398 NA non-coding upstream 224169 5061054 ~ 5061415 (+)
G154340 NA non-coding upstream 236197 5048986 ~ 5049387 (+)
G154335 NA non-coding upstream 260402 5024881 ~ 5025182 (+)
G154342 NA non-coding upstream 262294 5019748 ~ 5023290 (+)
G154560 NA non-coding downstream 62915 5358155 ~ 5358603 (+)
G154511 NA non-coding downstream 124872 5420112 ~ 5424220 (+)
G154620 NA non-coding downstream 132422 5427662 ~ 5427872 (+)
G154536 NA non-coding downstream 152816 5448056 ~ 5451291 (+)
G154564 NA non-coding downstream 158070 5453310 ~ 5454135 (+)
G154587 NA other upstream 14049 5271020 ~ 5271535 (+)
G153790 NA other upstream 545477 4733589 ~ 4740107 (+)
G153475 NA other upstream 1723580 3545125 ~ 3562004 (+)
G152451 NA other upstream 2522645 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 3757685 1526754 ~ 1527899 (+)
CI01000029_05461497_05468985 BATF other downstream 162001 5461497 ~ 5470346 (+)
G155079 NA other downstream 987445 6282685 ~ 6288398 (+)
G155083 NA other downstream 1136295 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1610948 6905834 ~ 6908633 (+)
G155522 NA other downstream 2339593 7634833 ~ 7637834 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017627 taar15 coding NC_007131.7 CM002904.2 46206998 ~ 46207984 (+)