CI01000029_06494856_06495812


Basic Information

Item Value
gene id CI01000029_06494856_06495812
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6494391 ~ 6495847 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_06494856_06495812.mRNA
CTATATAAACAGACTTTAAAAACTAACAAACCATTTTCACCATTTTAGACTTTTTTCAAATTTGTGTATGGTTTATAAAATTTTAAATGGCCTGGCCCCTTCTGTACTGTGATTTTGTTAGTTTTCGTCTTAATAATTCTGTGAAATCTACCAGATCATCATCTGTAACTAATTGTGTTGTTCCTTTTCGTCATTCTGCTTTTTGACTATCGTCTTTTGCTGTGAAAGCTACTACTCACTGGAATGCCTTACCAGAGGATATAAAAGGGTGTAAATCTATTGCTCTTTTTAAATTGAAGTAAAAATCGAATTAAATGGTTGCAGTTAAATTGATTTTTTTGGTCCTGATAGTATGTGTATGTATGTTTTATTGTATATATGTATTGTGTGTGTGTGTGTGTGTTTTTTTTTAACATTTATGTTGACCTGTCAGGGGACTGCGGGTGAAAACTAAAATCCGGTACAATGCATGGAATGGAAACATTTATGTTAAAAATTGTACATGGTCCCTTTACAAATAAATTAAGTAAATTCCTTATTGCTCTGCGCTTCTACGCAACTGGGACTTTCCACCAAGTTGTTGGTGACAATATAGGAGTGAACAAATCAACTGTCAGTGATGTGGTGAAATCTGTGTCAATCGCATTGGTGAGCCAAGTCAATCAATTTGTTTCATTTCCAAAGGATGACCAAATTGCCCAGACCAAGCACAAGTTTTTTCTTTTAGGAAACATGCCCAATACTATTGGGGTTATTGACTGCACTCATGTGCATGTACAAGCACCTCATGAGAGGGAGGAGAGTGCTCTATACAGAGAGCTCCAAAACAGCAGACCGGATGGCATTATATTAGGAGACAGTGCCTATCCACTCCTACCATGGCTGATGACCCCTTTTCTTGCAGCAAACACACCTGAGCAGGCACGCTTCAACACTGCTCATTGCAAAACAAGATGTACAATTGAGCGCTTAAATGGAGTCCTCAAGAGGCACTTTGCATGCCTTAACTACTTGCGAGTGGAACCACAGGGAGCATGCAACATAATACTTGCCTGTATTGTCCTGCACAACATTGCTAGAAAGCGTAATGTCCCTCTCTGTGATGAACATAGTGATAATGATCCACCTGAGCCTGCTTAATACCCAGACCAACCTCCGGCCTGACTGAACGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_06494856_06495812.mRNA True 1175 mRNA 0.39 3 6494391 6495847

Neighbor

gene id symbol gene type direction distance location
CI01000029_06453008_06476863 NA coding upstream 17301 6453008 ~ 6477090 (+)
CI01000029_06443365_06447942 CRNKL1 coding upstream 46449 6443365 ~ 6447942 (+)
CI01000029_06347167_06348123 NA coding upstream 146222 6346660 ~ 6348169 (+)
CI01000029_06305668_06307332 NKX2.4B coding upstream 186716 6305245 ~ 6307675 (+)
CI01000029_06294088_06295613 NA coding upstream 198365 6293019 ~ 6296026 (+)
CI01000029_06724205_06734079 HMBOX1B, HMBOX1 coding downstream 228358 6724205 ~ 6735582 (+)
CI01000029_06775631_06791278 INTS9 coding downstream 279784 6775631 ~ 6791346 (+)
CI01000029_06824397_06831521 CUNH14ORF169 coding downstream 327782 6823629 ~ 6832671 (+)
CI01000029_06834812_06849277 CPSF2 coding downstream 337730 6833577 ~ 6849518 (+)
CI01000029_06865685_06903896 SLC24A4, SLC24A4B coding downstream 369838 6865685 ~ 6903896 (+)
G155142 NA non-coding upstream 61586 6431948 ~ 6432805 (+)
G155128 NA non-coding upstream 102398 6391776 ~ 6391993 (+)
G155124 NA non-coding upstream 109351 6384764 ~ 6385040 (+)
G155121 NA non-coding upstream 112605 6381467 ~ 6381786 (+)
G155110 NA non-coding upstream 151620 6342548 ~ 6342771 (+)
G155162 NA non-coding downstream 18880 6514727 ~ 6514978 (+)
G155186 NA non-coding downstream 82428 6578275 ~ 6578494 (+)
G155196 NA non-coding downstream 106469 6602316 ~ 6602531 (+)
G155193 NA non-coding downstream 107248 6603095 ~ 6607105 (+)
G155194 NA non-coding downstream 177090 6672937 ~ 6680968 (+)
G155083 NA other upstream 4097 6431535 ~ 6490294 (+)
G155079 NA other upstream 205993 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 1024045 5461497 ~ 5470346 (+)
G154587 NA other upstream 1222856 5271020 ~ 5271535 (+)
G153790 NA other upstream 1754284 4733589 ~ 4740107 (+)
CI01000029_06906861_06907157 NA other downstream 410341 6905834 ~ 6908633 (+)
G155522 NA other downstream 1138986 7634833 ~ 7637834 (+)
G155627 NA other downstream 1435633 7931480 ~ 7932177 (+)
G156007 NA other downstream 2468971 8964818 ~ 9064541 (+)

Expression


Co-expression Network