G151705


Basic Information

Item Value
gene id G151705
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 527652 ~ 528002 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU172321
AGACACTTGGTGCCACACTCTAATCAGCTAATTAACTCAAAACACCTGCAAAGGCCTTTAAATGGTCTCTCAGTCTAGTTCGGTAGGCTACACAATCATGGGGAAGACTGCTGACTTGACAGTTGTCCAAAAGACGACCATTGACACATTGCACACGGAGGGCAAGACACAAAAGGTCATTGCAAAAGAGGCTGGCTATTCACAGAGCTCTGTGTCCAAGCACATTAATATAGAGGTGAAGGGAAGGAAAAGATGTGGTAGAAAAAAGTGTACAAGCAATAGGGATAACCGCACCCTGGAGAGGATTGTGAAACAAAACCCATTCAAAAATGTGGGGGAGATTCACAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172321 True 351 lncRNA 0.44 1 527652 528002

Neighbor

gene id symbol gene type direction distance location
CI01000029_00469836_00474738 NA coding upstream 52706 469836 ~ 474946 (+)
CI01000029_00443200_00452374 SPATS1, CNIH3 coding upstream 74580 441131 ~ 453072 (+)
CI01000029_00321187_00331540 NA coding upstream 195777 320130 ~ 331875 (+)
CI01000029_00263434_00300185 CD2AP coding upstream 227276 263434 ~ 300376 (+)
CI01000029_00643229_00643768 SRP09, SRP9 coding downstream 114561 642563 ~ 644285 (+)
CI01000029_00645958_00649352 EPHX1 coding downstream 117956 645958 ~ 649924 (+)
CI01000029_00711035_00714680 NA coding downstream 182950 710952 ~ 714948 (+)
CI01000029_00718512_00738422 NCOA1, FAM184A coding downstream 189493 717495 ~ 738592 (+)
CI01000029_00751587_00751771 ABRACL, CF115 coding downstream 223585 751587 ~ 752779 (+)
G151702 NA non-coding upstream 2440 524909 ~ 525212 (+)
G151681 NA non-coding upstream 65774 459158 ~ 461878 (+)
G151418 NA non-coding upstream 178746 341479 ~ 348906 (+)
G151493 NA non-coding upstream 187408 339988 ~ 340244 (+)
G151471 NA non-coding upstream 278568 248744 ~ 249084 (+)
G151677 NA non-coding downstream 7065 535067 ~ 535586 (+)
G151672 NA non-coding downstream 22819 550821 ~ 559637 (+)
G151758 NA non-coding downstream 141483 669485 ~ 669763 (+)
G151495 NA other upstream 155730 366541 ~ 371922 (+)
G151415 NA other upstream 302407 170521 ~ 225245 (+)
CI01000029_01526863_01527414 NA other downstream 998784 1526754 ~ 1527899 (+)
G152451 NA other downstream 2233592 2761594 ~ 2762939 (+)
G153475 NA other downstream 3017123 3545125 ~ 3562004 (+)
G153790 NA other downstream 4205587 4733589 ~ 4740107 (+)
G154587 NA other downstream 4743018 5271020 ~ 5271535 (+)

Expression


Co-expression Network