G154560


Basic Information

Item Value
gene id G154560
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5358155 ~ 5358603 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175484
CCACACAATACAAATATTAAAGCGAAAAATATGTATCAACGCAACTTTTATTAAGTAAACTTTCACTAAAAGCCTTCCTTCCACCGGAAAAATTAGTCCCTGACCGTGAACAGCAACAGAAGTTACATTATTACGCCATTAGATGGCGGCAAAGACTGTCTTTATGAGTGTGTGTCAGTCAGTAGTGAAGACTTTTAAATTGAAAGGCTGAGTTGTTGTGAACACGGAACAAGACGCAACTGACAAATGCTTTGACTAGCGCTGTCAGTCACGGAAAACCCCTTAACTGTTAAAAGGACAAGATAATACATCGGACATTTAAACAGATTTCTTTATTATGAACATGGGGCTGACCTGAAGGAAAATGCTAAATCTGAATGCAGGTAGGTCGCTCACTCGATCTCTTTCTCACAATACTCTTCTACATAATACAGTAAGCGTCAATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175484 True 449 lncRNA 0.39 1 5358155 5358603

Neighbor

gene id symbol gene type direction distance location
CI01000029_05341656_05353379 FLVCR2B, FLVCR2 coding upstream 4776 5340829 ~ 5353379 (+)
CI01000029_05338779_05339759 TAAR14B, TAAR14F, TAAR14G, TAAR14D, TAAR14E, TAAR14J, TAAR14H, TAAR14I, TAAR14L coding upstream 18244 5338570 ~ 5339911 (+)
CI01000029_05313679_05325092 TAAR14L, TAAR14E coding upstream 32972 5313474 ~ 5325183 (+)
CI01000029_05310130_05311110 TAAR14J, TAAR14H, TAAR14I, TAAR14L, TAAR14E coding upstream 46871 5309966 ~ 5311284 (+)
CI01000029_05301816_05302796 TAAR14L coding upstream 55262 5301651 ~ 5302893 (+)
CI01000029_05380959_05388911 NA coding downstream 22356 5380959 ~ 5389180 (+)
CI01000029_05390624_05394576 RAD51.S, RAD51.L, RAD51 coding downstream 32021 5390624 ~ 5394896 (+)
CI01000029_05402102_05409884 ZC3H14 coding downstream 43499 5402102 ~ 5409997 (+)
CI01000029_05433797_05436469 NA coding downstream 75042 5433645 ~ 5436494 (+)
CI01000029_05444811_05447063 NA coding downstream 84755 5443358 ~ 5447664 (+)
G154586 NA non-coding upstream 87775 5270132 ~ 5270380 (+)
G154398 NA non-coding upstream 296740 5061054 ~ 5061415 (+)
G154340 NA non-coding upstream 308768 5048986 ~ 5049387 (+)
G154335 NA non-coding upstream 332973 5024881 ~ 5025182 (+)
G154342 NA non-coding upstream 334865 5019748 ~ 5023290 (+)
G154511 NA non-coding downstream 61509 5420112 ~ 5424220 (+)
G154620 NA non-coding downstream 69059 5427662 ~ 5427872 (+)
G154536 NA non-coding downstream 89453 5448056 ~ 5451291 (+)
G154564 NA non-coding downstream 94707 5453310 ~ 5454135 (+)
G154572 NA non-coding downstream 212499 5571102 ~ 5571475 (+)
G154587 NA other upstream 86620 5271020 ~ 5271535 (+)
G153790 NA other upstream 618048 4733589 ~ 4740107 (+)
G153475 NA other upstream 1796151 3545125 ~ 3562004 (+)
G152451 NA other upstream 2595216 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 3830256 1526754 ~ 1527899 (+)
CI01000029_05461497_05468985 BATF other downstream 98638 5461497 ~ 5470346 (+)
G155079 NA other downstream 924082 6282685 ~ 6288398 (+)
G155083 NA other downstream 1072932 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1547585 6905834 ~ 6908633 (+)
G155522 NA other downstream 2276230 7634833 ~ 7637834 (+)

Expression


Co-expression Network