G154997


Basic Information

Item Value
gene id G154997
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6099762 ~ 6100189 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175981
GGTCTGACTGCCCACAAACTTCTGTCTCAGTGAAGACAGTGTTTGTTCAGGGACGTGATGGGGCAGTGACTCCAGATAACTTAACACGTAACGATCAGCATCCGTCAGGACAAACCGATGGCCAAACACTTCCACAGTAGCTCCAATAGAGAAGTCTGCTGGTCCGTAGTATTCTGGGTTTTCCACTGTGCTTCCTGGTTTTGGGACACGAGTCTTCTCTAGGAATTTTCCTCCGATGATGCCAGAATTACGTGTGGATTTCTCAAAGATGCAGATCATGTCATCAGACAGATAGTAAGACAGAATGAAGCGCCGTCCCTCATCCAGGGGATTCTGGGAATC

Function

NR:

description
PREDICTED: probable ATP-dependent RNA helicase DDX23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175981 True 342 lncRNA 0.48 2 6099762 6100189

Neighbor

gene id symbol gene type direction distance location
CI01000029_06086495_06092753 NA coding upstream 5903 6086495 ~ 6093859 (+)
CI01000029_06076254_06083211 XKR5 coding upstream 15551 6076121 ~ 6084211 (+)
CI01000029_06066859_06073942 NA coding upstream 25788 6066859 ~ 6073974 (+)
CI01000029_06015438_06024591 HADHA, HADHAA coding upstream 74679 6015438 ~ 6025083 (+)
CI01000029_05772821_05785145 NA coding upstream 314390 5772821 ~ 5785381 (+)
CI01000029_06214396_06222690 NA coding downstream 112689 6212878 ~ 6222735 (+)
CI01000029_06294088_06295613 NA coding downstream 192830 6293019 ~ 6296026 (+)
CI01000029_06305668_06307332 NKX2.4B coding downstream 205056 6305245 ~ 6307675 (+)
CI01000029_06347167_06348123 NA coding downstream 246471 6346660 ~ 6348169 (+)
CI01000029_06443365_06447942 CRNKL1 coding downstream 343176 6443365 ~ 6447942 (+)
G154996 NA non-coding upstream 5584 6079615 ~ 6094178 (+)
G154982 NA non-coding upstream 20164 6017523 ~ 6079598 (+)
G154980 NA non-coding upstream 96417 6003144 ~ 6003345 (+)
G154978 NA non-coding upstream 98066 6001412 ~ 6001696 (+)
G154975 NA non-coding upstream 100628 5998904 ~ 5999134 (+)
G155032 NA non-coding downstream 62462 6162651 ~ 6163392 (+)
G155041 NA non-coding downstream 63491 6163680 ~ 6163917 (+)
G155060 NA non-coding downstream 145494 6245683 ~ 6245975 (+)
G155061 NA non-coding downstream 146149 6246338 ~ 6246643 (+)
G155072 NA non-coding downstream 161986 6262175 ~ 6262474 (+)
CI01000029_05461497_05468985 BATF other upstream 629416 5461497 ~ 5470346 (+)
G154587 NA other upstream 828227 5271020 ~ 5271535 (+)
G153790 NA other upstream 1359655 4733589 ~ 4740107 (+)
G153475 NA other upstream 2537758 3545125 ~ 3562004 (+)
G152451 NA other upstream 3336823 2761594 ~ 2762939 (+)
G155079 NA other downstream 182496 6282685 ~ 6288398 (+)
G155083 NA other downstream 331346 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 805999 6905834 ~ 6908633 (+)
G155522 NA other downstream 1534644 7634833 ~ 7637834 (+)
G155627 NA other downstream 1831291 7931480 ~ 7932177 (+)

Expression


Co-expression Network