G154982


Basic Information

Item Value
gene id G154982
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6017523 ~ 6079598 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175961
TTTCTATTTCAAATAAATGCTGTTCTTTTGAACTTTCTATTCATCAAAGAATATTTTTCAACATTAATAATAATAATAATAAATGTTTCTTGAGCAGCAAATCATCATATTAGAATGATTTCAGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGGAATAAATTACATTTTAAAATATATTCAAATAGAAAATATTTAGTTTAAATTGTAATAATATTTCACAATATTACTGTTTTTACTGTATTTTTGATCAAATAAATGCAGCCTTGGTGAGCAGAAGAGACTCTAAAAACATTAAAAAAAAATCTTACTGACCACAAACTTTTGAATTTTTTCATGCTACAATCAAAAGGAAAAAAATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175961 True 392 lncRNA 0.25 2 6017523 6079598

Neighbor

gene id symbol gene type direction distance location
CI01000029_05772821_05785145 NA coding upstream 232151 5772821 ~ 5785381 (+)
CI01000029_05695252_05699826 NA coding upstream 317645 5693165 ~ 5699878 (+)
CI01000029_05591971_05597708 NA coding upstream 419681 5591971 ~ 5597842 (+)
CI01000029_05578983_05588654 NA coding upstream 427816 5578632 ~ 5589707 (+)
CI01000029_05577218_05577697 NA coding upstream 438986 5577218 ~ 5578537 (+)
CI01000029_06086495_06092753 NA coding downstream 6897 6086495 ~ 6093859 (+)
CI01000029_06214396_06222690 NA coding downstream 133280 6212878 ~ 6222735 (+)
CI01000029_06294088_06295613 NA coding downstream 213421 6293019 ~ 6296026 (+)
CI01000029_06305668_06307332 NKX2.4B coding downstream 225647 6305245 ~ 6307675 (+)
CI01000029_06347167_06348123 NA coding downstream 267062 6346660 ~ 6348169 (+)
G154980 NA non-coding upstream 14178 6003144 ~ 6003345 (+)
G154978 NA non-coding upstream 15827 6001412 ~ 6001696 (+)
G154975 NA non-coding upstream 18389 5998904 ~ 5999134 (+)
G154974 NA non-coding upstream 19065 5998089 ~ 5998458 (+)
G154958 NA non-coding upstream 41738 5975512 ~ 5975785 (+)
G154996 NA non-coding downstream 17 6079615 ~ 6094178 (+)
G154997 NA non-coding downstream 20164 6099762 ~ 6100189 (+)
G155032 NA non-coding downstream 83053 6162651 ~ 6163392 (+)
G155041 NA non-coding downstream 84082 6163680 ~ 6163917 (+)
G155060 NA non-coding downstream 166085 6245683 ~ 6245975 (+)
CI01000029_05461497_05468985 BATF other upstream 547177 5461497 ~ 5470346 (+)
G154587 NA other upstream 745988 5271020 ~ 5271535 (+)
G153790 NA other upstream 1277416 4733589 ~ 4740107 (+)
G153475 NA other upstream 2455519 3545125 ~ 3562004 (+)
G152451 NA other upstream 3254584 2761594 ~ 2762939 (+)
G155079 NA other downstream 203087 6282685 ~ 6288398 (+)
G155083 NA other downstream 351937 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 826590 6905834 ~ 6908633 (+)
G155522 NA other downstream 1555235 7634833 ~ 7637834 (+)
G155627 NA other downstream 1851882 7931480 ~ 7932177 (+)

Expression


Co-expression Network