G155718


Basic Information

Item Value
gene id G155718
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8228916 ~ 8231327 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176802
TATAAAATGTAAATTATATATCTTTATTTTTTACATCAACATAACTGCTTTTAATCAATTGTTGTATATTATTTTAGAATGCATTAACCATGACAATGAGACACAGATTCAGATATATTTCTGTTTATCCAGGTTAAAGCGCGGTGATGAAGGTTCACAGCTGAGGAACTCCAGGAGTTGGCCACCAGCCAGTACGGCGTTCCCTTCTCTTCTCCCCAGCCCAGGATCTTCACAGCATGGCCGCCCAGTTCGGATCCGGTCACATGCTGGTAAACGCCTGAGAGATCAAACAGAATAACTGACCGGTTCTGCAGATGACCGTTAAAAACACATGATTAAAGCGTGTGCTTTCTGACCCGTCTTGTACAGCAGGAAGTCCTCATAGACGGTGAAGGCCGCTTCCACCGGACCGTTGTTGTACAGTTCAGTCATGATCTGCTGCTGGTCCGACGGGAGGTTGTACGCTTTATAGCCTGCAGGGGGCGACAGGGACACGCAACATGAGGCAGTCGAGGAAAGTGACTAGAGGCCTGGAAGCTTGAAGGTGCAGCGAACTCACCGAAGTGTTTGTCCTGTTTGTAGGGGACGCTGTACTGCGGGATACAGGCCGCGTTACACTCCGGTGTGTCCTGCTCACCTGAACACGGCGGCCGGGTGCCGTTCACATGATGCTCACAGGGCGGGATGGTGTAGGGTCTGCAACCTAGAAATGTTCAAAAACAACAAACTCACAAACTATTATTATTTATTATTATTAGATTAATTTTATTTTAATATAATATTTTATTTCATTTTATAATTTTTAAAAAATATTT
>TU176804
TATAAAATGTAAATTATATATCTTTATTTTTTACATCAACATAACTGCTTTTAATCAATTGTTGTATATTATTTTAGAATGCATTAACCATGACAATGAGACACAGATTCAGATATATTTCTGTTTATCCAGGTTAAAGCGCGGTGATGAAGGTTCACAGCTGAGGAACTCCAGCCACCATCTCACTCTCAATCCCACACTCATCACGGCCTCTCAGGATCTTAAAATAACCGTTGTCGCCCCAGTCGGAGTTCCAGGAGTTGGCCACCAGCCAGTACGGCGTTCCCTTCTCTTCTCCCCAGCCCAGGATCTTCACAGCATGGCCGCCCAGTTCGGATCCGGTCACATGCTGGTAAACGCCCGTCTTGTACAGCAGGAAGTCCTCATAGACGGTGAAGGCCGCTTCCACCGGACCGTTGTTGTACAGTTCAGTCATGATCTGCTGCTGGTCCGACGGGAGGTTGTACGCTTTATAGCCGAAGTGTTTGTCCTGTTTGTAGGGGACGCTGTACTGCGGGATACAGGCCGCGTTACACTCCGGTGTGTCCTGCTCACCTGAACACGGCGGCCGGGTGCCGTTCACATGATGCTCACAGGGCGGGATGGTGTAGGGTCTGCAACCTAGAAATGTTCAAAAACAACAAACTCACAAACTATTATTATTTATTATTATTAGATTAATTTTATTTTAATATAATATTTTATTTCATTTTATAATTTTTAAAAAATATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176802 False 815 lncRNA 0.44 2 8228916 8231327
TU176804 True 733 lncRNA 0.44 4 8228916 8231327

Neighbor

gene id symbol gene type direction distance location
CI01000029_08198433_08203489 NA coding upstream 25378 8198365 ~ 8203538 (+)
CI01000029_08156225_08174249 SLC22A23 coding upstream 53780 8155914 ~ 8175136 (+)
CI01000029_08140259_08140582 NA coding upstream 87971 8140175 ~ 8140945 (+)
CI01000029_08072926_08079001 PHACTR1 coding upstream 149804 8072926 ~ 8079112 (+)
CI01000029_08053844_08058278 NA coding upstream 170395 8053844 ~ 8058521 (+)
CI01000029_08288440_08301175 NA coding downstream 57113 8288440 ~ 8301357 (+)
CI01000029_08318488_08338631 NA coding downstream 87161 8318488 ~ 8339359 (+)
CI01000029_08346604_08357224 NA coding downstream 115074 8346401 ~ 8357633 (+)
CI01000029_08367350_08368348 GPR6 coding downstream 135017 8366344 ~ 8368514 (+)
CI01000029_08425310_08441838 NA coding downstream 192470 8423797 ~ 8441847 (+)
G155731 NA non-coding upstream 1465 8227136 ~ 8227451 (+)
G155713 NA non-coding upstream 2358 8214359 ~ 8226558 (+)
G155698 NA non-coding upstream 73998 8154717 ~ 8154918 (+)
G155672 NA non-coding upstream 100951 8124776 ~ 8127965 (+)
G155691 NA non-coding upstream 130320 8098338 ~ 8098596 (+)
G155716 NA non-coding downstream 4874 8236201 ~ 8237301 (+)
G155722 NA non-coding downstream 9049 8240376 ~ 8240659 (+)
G155724 NA non-coding downstream 9848 8241175 ~ 8241628 (+)
G155723 NA non-coding downstream 10984 8242311 ~ 8242805 (+)
G155725 NA non-coding downstream 13672 8244999 ~ 8245490 (+)
G155627 NA other upstream 296739 7931480 ~ 7932177 (+)
G155522 NA other upstream 591082 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1321484 6905834 ~ 6908633 (+)
G155083 NA other upstream 1738622 6431535 ~ 6490294 (+)
G155079 NA other upstream 1940518 6282685 ~ 6288398 (+)
G156007 NA other downstream 733491 8964818 ~ 9064541 (+)

Expression


Co-expression Network