G168543


Basic Information

Item Value
gene id G168543
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 1408728 ~ 1408948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU191441
ATTTGCAGAGAGACTGTGGGAAGTTACATGATGAGATGTACTGTACGCTGTGATGGCTCTGGCAGCAGAGACAGCATGGGGAACTGTAATGATAATCACTTCTCTTTAGTTTCCACAGCAGGCAGTCTCCATATAAACACCATCTTAAAAACTAGATGGAACCATAACCATGCTGATGATACCACCTCTCAAGAGTGTGAACATTTTGTCAGATAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191441 True 221 lncRNA 0.41 1 1408728 1408948

Neighbor

gene id symbol gene type direction distance location
CI01000033_01375935_01378229 NA coding upstream 29540 1375444 ~ 1379188 (+)
CI01000033_01351073_01357901 CRB3A, CRB3 coding upstream 50678 1350535 ~ 1361048 (+)
CI01000033_01281864_01292221 NA coding upstream 116502 1281864 ~ 1292226 (+)
CI01000033_01208922_01226195 HS3ST3A1, HS3ST3B1B, HS3ST3B1, HS3ST3B1A coding upstream 182482 1208631 ~ 1226246 (+)
CI01000033_01178655_01186085 NA coding upstream 222582 1178393 ~ 1186146 (+)
CI01000033_01620320_01661230 TTYH2L coding downstream 208852 1617800 ~ 1661323 (+)
CI01000033_01677995_01745060 NA coding downstream 268398 1677346 ~ 1745398 (+)
CI01000033_01765591_01779307 NA coding downstream 355719 1764667 ~ 1779344 (+)
CI01000033_01902490_01903373 NA coding downstream 493542 1902490 ~ 1903407 (+)
CI01000033_01928170_01932495 NA coding downstream 519178 1928126 ~ 1932573 (+)
G168539 NA non-coding upstream 1957 1406560 ~ 1406771 (+)
G168536 NA non-coding upstream 3523 1404992 ~ 1405205 (+)
G168532 NA non-coding upstream 7001 1401501 ~ 1401727 (+)
G168530 NA non-coding upstream 9141 1399247 ~ 1399587 (+)
G168561 NA non-coding downstream 40324 1449272 ~ 1449500 (+)
G168562 NA non-coding downstream 42840 1451788 ~ 1452032 (+)
G168563 NA non-coding downstream 45782 1454730 ~ 1454948 (+)
G168578 NA non-coding downstream 96624 1505572 ~ 1507970 (+)
G168586 NA non-coding downstream 108176 1517124 ~ 1518392 (+)

Expression


Co-expression Network