CI01000034_04690669_04706837


Basic Information

Item Value
gene id CI01000034_04690669_04706837
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4690487 ~ 4706959 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04690669_04706837.mRNA
ATGTTACACTAGCCTTCTTCTGTCCCTTTGGCAAATTTGCAGTGTATTAAATATTAAAACAGTCTTTTCTTTCCTCGGGGTGGTAAAATTTCAGGTTTGAGAGTTGTGTTTTTCTCGTCGAGATGGCTGGGGGCATTACAGAAACAGGGGAGCCTTACTCACCATTTGTTGGCTTGGTGTACATGTTCAATCTTATTGTTGGCACTGGTGCCCTGACCATGCCCAAGGCCTTTGCAGCAGCTGGCTGGGTAGTCAGCGTCTCCCTCATCACATTTTTGGCTTTTATGAGTTTCATGACCACCACATTTGTGATTGAAGCCATGGCTGCTGCCAATGCCCAGCTGCGCTGGAAGAGGAGAGAACAGGAAGAGGGTATTCCCTATGAAAATTACACTGTTCATGGAAATGTTACACGTCCCACTGCAGAGCGTGCCGCGAATATAGACCACTTTGACATTGTCGAGAGAGTCGAGATGGGACAAATGGCCTCCATGTTTTTTAATAAAGTTGGTGTCAACATGTTCTACATCTGCATAATCGTGTACCTGTACGGAGACCTGGCCATTTATGCCGCCGCTGTACCCGTATCACTGATGGAGGTAACATGTGGGAATCACTCGTGCAGTGCTGGGAGTGTGAAATACAACGACACCGACTCATGCTGGGGCCCTGTAAGACGCAAAGACGCCTACAGAATGTTTCTGATAAGGATCTTTATTCCCCTTCATGCTCAGTTTGTCATCCCGTGTTGAGTTTTAAGATGAGGTCACGTGCTGTGTCTTTATGTATGTCGTGTATCGGCTGTAATTGAGTTTAGTTTATTAGATCATTTAGGAAGCTAGAAGAAACAACCTACATCTTCCATTCCCAAACTCAGAATTTTTTGACTAGAAGGTCATCATTAATTTTCCTTCTGGACATGTCATTAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04690669_04706837.mRNA True 934 mRNA 0.44 8 4690487 4706959

Neighbor

gene id symbol gene type direction distance location
CI01000034_04652096_04678983 TMEM104 coding downstream 11450 4651934 ~ 4679037 (-)
CI01000034_04630595_04640739 NA coding downstream 49500 4630541 ~ 4640987 (-)
CI01000034_04466151_04467388 RLN3A coding downstream 223007 4465852 ~ 4467480 (-)
CI01000034_04451917_04454531 NA coding downstream 235956 4451459 ~ 4454531 (-)
CI01000034_04431146_04446849 SMARCA4A, SMARCA4 coding downstream 243319 4431146 ~ 4447168 (-)
CI01000034_04710539_04725888 TNPO2, TNPO2.S coding upstream 2454 4709413 ~ 4725888 (-)
CI01000034_04823597_04824920 NA coding upstream 116362 4823321 ~ 4825135 (-)
CI01000034_04870434_04878415 SLC5A11 coding upstream 163402 4870361 ~ 4878415 (-)
CI01000034_04887739_04917230 GRID2IPA coding upstream 180758 4887717 ~ 4917230 (-)
CI01000034_04921458_04934523 E4F1 coding upstream 214210 4921169 ~ 4934523 (-)
G172551 NA non-coding downstream 68100 4622142 ~ 4622387 (-)
G172542 NA non-coding downstream 82271 4607979 ~ 4608216 (-)
G172541 NA non-coding downstream 82711 4607523 ~ 4607776 (-)
G172539 NA non-coding downstream 84040 4606073 ~ 4606447 (-)
G172535 NA non-coding downstream 90023 4600248 ~ 4600464 (-)
G172626 NA non-coding upstream 134306 4841265 ~ 4841496 (-)
G172627 NA non-coding upstream 136495 4843454 ~ 4845428 (-)
G172633 NA non-coding upstream 240922 4947881 ~ 4948092 (-)
G172609 NA non-coding upstream 277919 4984878 ~ 4986139 (-)
CI01000034_04988799_04990480 MSRB1A, MSRB1 non-coding upstream 280380 4988681 ~ 4990480 (-)
CI01000034_04216451_04218876 NA other downstream 472745 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 518317 4165373 ~ 4172272 (-)
G172151 NA other downstream 1292674 3391144 ~ 3451802 (-)
G172016 NA other downstream 1453872 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 2178966 2510061 ~ 2511521 (-)
G172593 NA other upstream 286001 4992960 ~ 4994943 (-)
G172800 NA other upstream 1082073 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1090611 5795835 ~ 5811781 (-)

Expression


Co-expression Network