Gene
RNA
| Item | Value |
|---|---|
| gene id | G172643 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000034 |
| NCBI id | null |
| chromosome length | 5914002 |
| location | 5052400 ~ 5052726 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196134 | True | 327 | lncRNA | 0.44 | 1 | 5052400 | 5052726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000034_05006303_05007855 | NA | coding | downstream | 44539 | 5006117 ~ 5007861 (-) |
| CI01000034_04997343_04999344 | RPS2, RS2 | coding | downstream | 53056 | 4997318 ~ 4999344 (-) |
| CI01000034_04988799_04990480 | MSRB1A, MSRB1 | coding | downstream | 61920 | 4988681 ~ 4990480 (-) |
| CI01000034_04978655_04981311 | HAGH, HAGH.L, HAGHL | coding | downstream | 71089 | 4978074 ~ 4981311 (-) |
| CI01000034_04951993_04959847 | NA | coding | downstream | 92553 | 4951530 ~ 4959847 (-) |
| CI01000034_05093584_05096564 | NA | coding | upstream | 40336 | 5093062 ~ 5096564 (-) |
| CI01000034_05147520_05150640 | WFIKKN2, WFIKKN2A | coding | upstream | 94280 | 5147006 ~ 5150640 (-) |
| CI01000034_05167889_05175190 | ANKRD40 | coding | upstream | 115163 | 5167889 ~ 5175312 (-) |
| CI01000034_05176199_05177220 | NA | coding | upstream | 123240 | 5175614 ~ 5177220 (-) |
| CI01000034_05189944_05197158 | NA | coding | upstream | 137158 | 5189884 ~ 5197531 (-) |
| G172609 | NA | non-coding | downstream | 66261 | 4984878 ~ 4986139 (-) |
| G172633 | NA | non-coding | downstream | 104308 | 4947881 ~ 4948092 (-) |
| G172627 | NA | non-coding | downstream | 206972 | 4843454 ~ 4845428 (-) |
| G172626 | NA | non-coding | downstream | 210904 | 4841265 ~ 4841496 (-) |
| G172644 | NA | non-coding | upstream | 400 | 5053126 ~ 5053360 (-) |
| G172645 | NA | non-coding | upstream | 981 | 5053707 ~ 5054597 (-) |
| G172706 | NA | non-coding | upstream | 47555 | 5100281 ~ 5100485 (-) |
| G172714 | NA | non-coding | upstream | 99303 | 5152029 ~ 5152695 (-) |
| G172716 | NA | non-coding | upstream | 102760 | 5155486 ~ 5155685 (-) |
| G172593 | NA | other | downstream | 57457 | 4992960 ~ 4994943 (-) |
| CI01000034_04216451_04218876 | NA | other | downstream | 834658 | 4216212 ~ 4221881 (-) |
| CI01000034_04165535_04172272 | KCTD13 | other | downstream | 880230 | 4165373 ~ 4172272 (-) |
| G172151 | NA | other | downstream | 1654587 | 3391144 ~ 3451802 (-) |
| G172016 | NA | other | downstream | 1815785 | 3234963 ~ 3236615 (-) |
| G172800 | NA | other | upstream | 736306 | 5789032 ~ 5789738 (-) |
| CI01000034_05795972_05811363 | NA | other | upstream | 744844 | 5795835 ~ 5811781 (-) |
