CI01000036_00134824_00154438 (RAMP1)


Basic Information

Item Value
gene id CI01000036_00134824_00154438
gene name RAMP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 134673 ~ 154471 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00134824_00154438.mRNA
CTATATAAGTCTAATAGGAATCCTGATTGATCCTGCACACATTCCTTTGATTTTTTTTTTTTTTACCTCACGCAAACATTTCTTTCCCGCTTTATTTTTCTTGGAGTCTCACCTGTCACGTAATTGATGTGATAGTTGTTATTGACTAACAATGAGCCAAGGGGAGCGCAGTCACTGCAGTTCTGAGTGTGAATCTGTCTCTCGTACTGATCAGACGCTTTTCTTTACAGCTTTGGGGGCGAGTGCTGTGAACCTATCTGTGCTAACGATGGCATGCAGCAGTCACTATGGAAATGCCATCGAGGAGTTCTGCCTGGCCAAGTTCAAGCTGGACATGGAGGTTCTCGATCAGCGCCAGTGGTGCAGCTGGGAGGACACTGTTGAGTCCTATGGAGAACTGACCAACTGCACGTTCCTGGTGGCTCTGAAGATGAACTGTTTCTGGCCCAACCGAATGGTGGATGAATTCTTCATCCGGGTGCACAGGCACTACTTCCATGACTGTTCATTGTCTGGACGGCTGCTTCACGACCCACCCAATCGGATCTTGGGGCCTTTTATCGTGGTGCCCATTCTGCTCTGTGTCCACAGTGAGTGGATTAAAAGCCTGTGGTTTTCACCTGCCTGTGGCGAACTGGACAGCAGCACAGAGACACCAGATGTCTCTAATGTCAGCTGAATTTCAAAGCCTCTGATTTCTGCTGAAGTTATA

Function

symbol description
ramp1 Predicted to enable coreceptor activity. Predicted to be involved in several processes, including angiogenesis; protein localization to plasma membrane; and receptor internalization. Predicted to act upstream of or within intracellular protein transport and regulation of G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in cell surface. Orthologous to human RAMP1 (receptor activity modifying protein 1).

GO:

id name namespace
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K08447 RAMP1; receptor activity modifying protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00134824_00154438.mRNA True 712 mRNA 0.48 4 134673 154471

Neighbor

gene id symbol gene type direction distance location
CI01000036_00079301_00108297 EPB41L5 coding upstream 26322 78244 ~ 108351 (+)
CI01000036_00035463_00045529 PTPN4 coding upstream 88831 34212 ~ 45842 (+)
CI01000036_00015321_00016253 TMEM177 coding upstream 118290 14512 ~ 16383 (+)
CI01000036_00230834_00232989 NA coding downstream 75167 229638 ~ 232992 (+)
CI01000036_00234733_00237131 NA coding downstream 79261 233732 ~ 237344 (+)
CI01000036_00322865_00441961 IGSF3 coding downstream 168394 322865 ~ 441961 (+)
CI01000036_00457595_00467133 TTF2 coding downstream 303124 457595 ~ 467133 (+)
CI01000036_00542557_00543309 NXPH2, NXPH2A coding downstream 388086 542557 ~ 543386 (+)
G173131 NA non-coding downstream 33956 188427 ~ 188635 (+)
G173133 NA non-coding downstream 36506 190977 ~ 191231 (+)
G173134 NA non-coding downstream 38052 192523 ~ 192725 (+)
G173104 NA non-coding downstream 56820 211291 ~ 213770 (+)
G173158 NA non-coding downstream 89501 243972 ~ 267251 (+)
G173152 NA other downstream 320881 475352 ~ 478171 (+)
G173157 NA other downstream 425591 580062 ~ 581006 (+)
G173327 NA other downstream 708824 863295 ~ 864154 (+)
G174214 NA other downstream 1591881 1746352 ~ 1747188 (+)
G174289 NA other downstream 1830413 1984884 ~ 2006413 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037879 RAMP1 coding NC_007120.7 CM002893.2 28778649 ~ 28867908 (-)