CI01000036_00230834_00232989


Basic Information

Item Value
gene id CI01000036_00230834_00232989
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000036
NCBI id null
chromosome length 2115676
location 229638 ~ 232992 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000036_00230834_00232989.mRNA
GCATATATAGGGAACAGAAAAATACATAACTACCTGGACTTGGTCAGGGCCGTAGACAAGGTTCATAAGCTGGTCACATTGGTGAGGCTTATGCAGAGAGAATCTGCATTTGCAACGCAAGAAAGTCTAGGTTATAAAACCTTACAAACGTGGACAGCGAGGCCCAGCCAGCCGCCTCACAGATTTCCACGATGGACACGCCAGTGGACCATGCCCAAGAAGAGGCCATGCCTCTTGTGGAGTGCGCTTTAACACCTATAGGACATTGCAGGCCTAAGGAGGAATAAGCGAGCGCTAGAGCATCGACTCTCCACCTGGATAACCTGGGCTTCGTGACCGGAAGACCTCTCGTGCGGCCACCGAAGAAGACAAAAAGTTGTTCCGACTGACGAAAAGAGGCGGAACCATCGATGTAGGCCCTCAGGGCCCTGACGGGACAGAGTAGTTTCAACTCCTGATCATCCTAGGAAGGAGGAAGTGGGGAGAGAATGACCATCTGCGCCCTAAACGGGGTAGATAGGACCTTCGGGACGTATCCATATCTTGGTTTCAGGACGACTTTGGAGTCGTTAGGCCCGAATTCAAGACAGGAGGGGCTCACAGGGAGCGCCTGCAAATCTCCCACTCGCTTAACCAATGCTAAGGCTAGCAATAAGGCGTTTTTTTAGCGATAGGGGACGTAAGTCGGCAGTCTGGAGTGGTTCAAAAAGAGGGCCCTTAAGACCTCTAAGAGCCTCCTAGATCCCTTTAGGAAGTGAACAACAAGGTTGTTTCTCCCTATTGGCTGCCCTGCTAAAGGAGCATGGGAGGCTGTTATAGCAGCGACATAGACTTTAAGAGTAGAGGGAGTACGGCCCCTATCCATTAAGTCCTGAAGGATGGACAATATCAGGGATATGTCAGGTAAATGGGTCTTCGTTCCGGGCTGTACATCAGGCAGCAAAGACTGGCCATTTTAGGAAGTAGAGCCGTCTCCTTGACAAGGCTCTAGCTCCATAGAGGAGCCACCAGGAGGACTTTGTGGGTACCCTTCCTGATTCGCTTGATAACCTGGGTGTAACGCGCATCGCGGCGCAAGTGCGACCCTCCCTCTCAAACAGTGAATAACGGAAATGAGCAGAGAAGGAATACACCGTTTCTAAATTTGGACCAGCGACCAGAAGATCAGACTCGCTCAAGAGACTGTGTCAGCAACAATGGTAGAAGGAAATGACGACAACACTGGCTGCATTAGAAACAGCTCGATCCTTATATGGGCATGGCTCGCCAGTTCCTGCTCGCAGTCTCTTTTTTTAGTGCAATGCAGGGACAGTTCAAGTTCAAAGTCTTCTTCGCGATCGTCCGGTTCCAGAAAATATGCAAGAGAATTCAAATTTTCTAGTTATGAAGTTTCCAGACAGGCCAAACTCCAACCTCTGGAAGACCACGTCGGAACTGCTGTTTCTCTCTCTCGCATCGCGCATTCTCGCTTCGTCTTCTCTCTCGCACAGCCTCGATCGGCTCTTGGTAACCTGGGTTACATGGGGAATCAGAGCGATCGGGAGAAAAGCGTACAGGAGAAGGCTGGGCCAATCGTGGGCCTTCGCATCCCTGGTCTTTGAAAA

Function

NR:

description
lambda-recombinase-like protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000036_00230834_00232989.mRNA True 1604 mRNA 0.51 4 229638 232992

Neighbor

gene id symbol gene type direction distance location
CI01000036_00134824_00154438 RAMP1 coding upstream 75167 134673 ~ 154471 (+)
CI01000036_00079301_00108297 EPB41L5 coding upstream 121287 78244 ~ 108351 (+)
CI01000036_00035463_00045529 PTPN4 coding upstream 183796 34212 ~ 45842 (+)
CI01000036_00015321_00016253 TMEM177 coding upstream 213255 14512 ~ 16383 (+)
CI01000036_00234733_00237131 NA coding downstream 740 233732 ~ 237344 (+)
CI01000036_00322865_00441961 IGSF3 coding downstream 89873 322865 ~ 441961 (+)
CI01000036_00457595_00467133 TTF2 coding downstream 224603 457595 ~ 467133 (+)
CI01000036_00542557_00543309 NXPH2, NXPH2A coding downstream 309565 542557 ~ 543386 (+)
CI01000036_00947110_00948159 CXCR4B coding downstream 714118 947110 ~ 948666 (+)
G173104 NA non-coding upstream 15868 211291 ~ 213770 (+)
G173134 NA non-coding upstream 36913 192523 ~ 192725 (+)
G173133 NA non-coding upstream 38407 190977 ~ 191231 (+)
G173131 NA non-coding upstream 41003 188427 ~ 188635 (+)
G173158 NA non-coding downstream 10980 243972 ~ 267251 (+)
G173169 NA non-coding downstream 44319 277311 ~ 277520 (+)
G173170 NA non-coding downstream 47608 280600 ~ 280882 (+)
G173171 NA non-coding downstream 48291 281283 ~ 281500 (+)
G173159 NA non-coding downstream 214178 447170 ~ 448008 (+)
G173152 NA other downstream 242360 475352 ~ 478171 (+)
G173157 NA other downstream 347070 580062 ~ 581006 (+)
G173327 NA other downstream 630303 863295 ~ 864154 (+)
G174214 NA other downstream 1513360 1746352 ~ 1747188 (+)
G174289 NA other downstream 1751892 1984884 ~ 2006413 (+)

Expression


Co-expression Network