CI01000037_02282458_02287205


Basic Information

Item Value
gene id CI01000037_02282458_02287205
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 2281347 ~ 2287285 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_02282458_02287205.mRNA
ATATAAAAGCCGATACTCAAATCTGCCAATATTGAAAAAGAAAAAAGGTGTTGAGTGTTGACTGATATGTGTCTTCCGGTGCCCAAGGCTGATATCAATGTCAAAAGTGCAGAGTTGCGGAGTTCTGATACAATGTAATAACATATACCTGGCTGGTAGCAAATGAGATTTTCACAAGATCAATGAAGTGAAACAAACTCTTATTTTACACAATGAGTAAATAAAATGTTTATTCTAACAAGTGGACATGGTTACCAGTCAGTGCTAATAATTTGTAAGTGGCTAAATATTGACCTGTTAAAGGGTTAGTCCACCTAAAAATGAAATTTCTGTCATTAAGTACTGACCCTCATGTCACCCCAAACCTGTAAGAAATCCAAGGGTTTCTGAAGCACACATATATATATACGTCATTGCACATTTTGAGGTCCTAAAAAGTATTAAAGACGTCGTTAAAATAGTCCATGTGACTACAGTGGTTCAACCTTAATGTTATGAAATGACAAGAATACTTTTTGTGTGCAAAAACAAAACAAAAATAACGACTTTATCAACAATTTATTCTCTCTCCTGTCAGTTTCTTGCGCTGTTGACATAGTGAACGCAGTGCAGAGCTTCCGTGTTTACGTCTGGACACCAGTCCAGTATTGGCGACTCTGTACATGTGAGCACCATGATGCATGCGTGTAATGCTGACCAATAATGAGTCAGCGTTCTGACGTAGAACACAGAAGCGTTTACTGGTTTGGAACGACATGAGGGTGAGTAATTAATGATAGAAATTTAATTTTTGGGTGAACTAACACTTTAATGGTCTGGCCAGTCAGTAACATTGATTTAATTTCTTTCAGAGTAGTAAATCTATGTGCAAATGCATGTGAAAATATGATATAACTTTCTTTAGGTAAGTCAAAGCCTGTCAATTCTGTTTGAAAATTAAGTAAAATTGACTCATGAATTGACTCGTTCTTTATTTAGCTCATGTTTCTTTCTGCCCTTGCAAACATTGTACTGTAGGTGGCAGTAATGGTCATGTGATGTTAAACGTCTCTCACATAAGCGCAGAACAAGAGCGCTTTTTCCTGCGATCCCCGGAACTGGACTGAGAAATATGGCGTCGCACAGGGGAGACAGAACGAAAAACCCCACATCAAATGCTGGAGATGTTTCCAAAATCGACCTTCTGCTTCACCCAGAGCTCCTTTCTCAAGAGTTCATTCAGCTCATGTTACATGAGAGGAAGATAGCAGTGCGTAATCATGAGGACCGTGACCAACTGACAGGTCTGTACCTGCGGCATGTCCTCCCTCTCCCGCAGAGAGATCTGCCCAGCAGCCGCTGGGGGAAGAGGATGGAGAGGAGCAAAGCGCGGCAGAGCTGCACCAGTGCGCACAGTTCAAGCACTGATAGTGGCAGGAAGAGGCCGTTGATTGTGTTTGATGGCAGCTCTACTAAAACTGGCAGTGTGAAGCTGAAGAAACCCGATACTTCATCAGCACCTGTCGCCACAGACCGAATAAAGCCCCCAGTTTCCAGTATCAGTCTCACAAACCCCATACGCAAGCTCTCTGGGACCTCTACAAACTGCTCTTCCTCAAATTCCTCTAACAGGACCCCAGTGTCATCGCCAGGAGCCAGTCCCAAAAGCCCCTGTAATCACTCTAACACTGCCAACTCCTCGCCACATTCAAACAATACCACGTCTAAGCTAAAGCGCACGTCCCCCAGCGATGGAGAACATGACACTGCTATGAATAACGCCACTGACATCATCTGCTGGGTCTCTGTGTTGGCCAAGAAAGACACTCATGATGAGACACATGAATTTGAAAGATTGGTTCTTATCACACACCTCAAGTTGTCAATCTCACCTTTACTTACCAGCCTCAGGAAAAGTGACTTGTGCAGTGTGACCCTCCGGTTCATTTCACAACCAGGAAATGCTTCGGCTTTAGGCTTGGTGTAGTGATGAAGGAACTGACACATTCCTAGCAGTTTTATGTTGGACTGATCAGAGTTTCCCTTTAGAAATCTTTCTTGCAATTA

Function

GO:

id name namespace
GO:0048598 embryonic morphogenesis biological_process

KEGG:

id description
K15432 ASW; ashwin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_02282458_02287205.mRNA True 2046 mRNA 0.43 4 2281347 2287285

Neighbor

gene id symbol gene type direction distance location
CI01000037_02279319_02280446 GPR45 coding upstream 591 2279158 ~ 2280756 (+)
CI01000037_02248789_02250329 POU3F3 coding upstream 30226 2248594 ~ 2251121 (+)
CI01000037_02087502_02094770 NA coding upstream 186279 2087502 ~ 2095068 (+)
CI01000037_02065346_02075634 NA coding upstream 205063 2065276 ~ 2076284 (+)
CI01000037_01965864_01966433 COA5, CB064 coding upstream 314912 1965603 ~ 1966435 (+)
CI01000037_02334480_02338932 NA coding downstream 44179 2331464 ~ 2338989 (+)
CI01000037_02378066_02392175 NCK2A, NCK2 coding downstream 90781 2378066 ~ 2392871 (+)
CI01000037_02405252_02406221 NA coding downstream 117498 2404783 ~ 2406437 (+)
CI01000037_02414352_02418569 C6H2ORF40, ECRG4A coding downstream 127067 2414352 ~ 2418752 (+)
CI01000037_02527352_02576225 TMTOPS2B coding downstream 238817 2526102 ~ 2576704 (+)
G175693 NA non-coding upstream 138084 2142951 ~ 2143263 (+)
G175689 NA non-coding upstream 141535 2139589 ~ 2139812 (+)
G175674 NA non-coding upstream 207707 2073428 ~ 2073640 (+)
G175670 NA non-coding upstream 216811 2064172 ~ 2064536 (+)
G175641 NA non-coding upstream 221268 2031546 ~ 2060079 (+)
G175630 NA non-coding downstream 11042 2298327 ~ 2300350 (+)
G175767 NA non-coding downstream 15452 2302737 ~ 2303537 (+)
G175769 NA non-coding downstream 24922 2312207 ~ 2312711 (+)
G175777 NA non-coding downstream 125616 2412901 ~ 2413354 (+)
G175858 NA non-coding downstream 319093 2606378 ~ 2609995 (+)
G174949 NA other upstream 667073 1613876 ~ 1614274 (+)
CI01000037_00987906_00988350 NA other upstream 1291588 987859 ~ 989246 (+)
CI01000037_00228809_00230442 NA other upstream 2050951 228809 ~ 230730 (+)
G176346 NA other downstream 552475 2839760 ~ 2840053 (+)
G176377 NA other downstream 689577 2976862 ~ 3087968 (+)
CI01000037_04213179_04218057 NA other downstream 1925998 4212907 ~ 4218305 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037615 C9H2orf49 coding NC_007120.7 CM002893.2 6607514 ~ 6618067 (-)