CI01000041_00831120_00832182 (MED31.S, MED31, MED31.L)


Basic Information

Item Value
gene id CI01000041_00831120_00832182
gene name MED31.S, MED31, MED31.L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000041
NCBI id null
chromosome length 1396997
location 830793 ~ 832182 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000041_00831120_00832182.mRNA
AGGAGCAGGCAAGAACCCGTTTCCAGCTGGAGTTGGAGTTTGTTCAGTGCCTAGCGAACCCAAATTATCTGAACTTTCTGGCTCAAAGAGGTTACCTGAGAGAGAAGCCTTTTGTCAATTACTTAAAGTATCTACTCTACTGGAAAGAACCAGAATATGCTAAATTCCTGAAATATCCTCATTGTCTGCACATGTTAGAGCTGTTGCAGTATGAGCACTTCCGAAAGGAGCTGGTGAATGCACAGTGTGCCAAGTTCATTGATGAACAGCAGATCCTGCACTGGCAGCATTACTCACGAAAGCGCACACGCCTACAGCAAGCACTCGCGGAGCAGCAGCAGCAACAGCAGCCTCAGGCTCCATCCCATGGCAACACCACCTCCAAATGAGGCAGTCAACATGCTCCTGCTGCCAGTTACTCTTTCACTGGAGTATTTTTGTAAAAAGTCATTTTCAAATGGGCTTTTTCCAAAATTTGAATAGGACTTGGACAAAGTGCCATCTGTTGGCCACTAATGTTGTGTCTGTTTATGAACGACTGGAGAGAAAAGTAAAAGAGCTTCAAGAGAAGGTAAGGGGAGAGTGAAATAGATTGCTGTATGTCTTGTCTTACAGTTGCCACCTCCACCTGTTACATGCTTTATCTTATAAATGTTTCTATTATGTTTATGTATGCATTTTGGACAAAAAAAACAGAAACCCAAATCCAAAATAAA

Function

symbol description
med31 Predicted to enable transcription coregulator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of core mediator complex and mediator complex. Orthologous to human MED31 (mediator complex subunit 31).

GO:

id name namespace
GO:0005654 nucleoplasm cellular_component

KEGG:

id description
K15153 MED31, SOH1; mediator of RNA polymerase II transcription subunit 31

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000041_00831120_00832182.mRNA True 716 mRNA 0.43 3 830793 832182

Neighbor

gene id symbol gene type direction distance location
CI01000041_00788782_00820960 SLC47A2, MATE4 coding downstream 9833 788571 ~ 820960 (-)
CI01000041_00773471_00786223 NA coding downstream 44557 773188 ~ 786236 (-)
CI01000041_00725773_00730249 NA coding downstream 100096 725773 ~ 730697 (-)
CI01000041_00599917_00600207 NA coding downstream 229065 599756 ~ 601728 (-)
CI01000041_00570879_00582725 SGK494B coding downstream 248068 570175 ~ 582725 (-)
CI01000041_00834374_00846570 SLC13A5A coding upstream 1977 834159 ~ 846570 (-)
CI01000041_00919360_00936424 SLCO2B1 coding upstream 86623 918805 ~ 937874 (-)
CI01000041_01251189_01270821 AMOT coding upstream 418870 1251052 ~ 1270821 (-)
CI01000041_01328043_01337229 PGK, PGK1 coding upstream 495795 1327977 ~ 1337229 (-)
CI01000041_01363670_01364316 MRPS17 coding upstream 531261 1363443 ~ 1364604 (-)
G188846 NA non-coding downstream 31094 798827 ~ 799699 (-)
G188840 NA non-coding downstream 58716 771873 ~ 772077 (-)
G188830 NA non-coding downstream 73269 756456 ~ 757524 (-)
G188829 NA non-coding downstream 77110 753445 ~ 753683 (-)
G188823 NA non-coding downstream 92354 737592 ~ 738439 (-)
G188798 NA non-coding upstream 18997 851179 ~ 858392 (-)
G188866 NA non-coding upstream 59353 891535 ~ 891904 (-)
G188869 NA non-coding upstream 61751 893933 ~ 894207 (-)
G188876 NA non-coding upstream 69981 902163 ~ 902508 (-)
G188885 NA non-coding upstream 79667 911849 ~ 912059 (-)
G188717 NA other downstream 423567 399776 ~ 407226 (-)
G188704 NA other downstream 541884 288441 ~ 289373 (-)
G188698 NA other downstream 569174 260919 ~ 261619 (-)
G188902 NA other upstream 149178 981360 ~ 981845 (-)
G188932 NA other upstream 193675 1025857 ~ 1026291 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_019806 med31 coding NC_007132.7 CM002905.2 40045224 ~ 40049642 (-)