CI01000046_00665298_00665879



Basic Information


Item Value
gene id CI01000046_00665298_00665879
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 665298 ~ 665879 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000046_00665298_00665879.mRNA
ATGTTGCGAGTCTCATCCGTGTCTCTTACTTTAATTCCAGTGTTCATTTTATGGGGCACAGAGTGTGTCCTGCTGCGAAAAGCTTCAAAACTGTGGCTGCAGCCGCTGAACGAGACGCACCTGCAGACTGGGACGTTTCCCAGCGGGTTCCTGTGGGGCGTCGGGACCTCGGCGTTCCCGACCGAAGGCTCCTGGGATGCAGATGGGAAGGGTGAGTCCGTGTGGGACCGTTTCACCCATCATTCCCGCACAGACAGATCGGCCAGTGACAGTTATGTTCAGTGGGAAGAGGATTTGAGATCGGTTCAGTATTTGGGTGTGAAGTTCTACACCTTTTCTCTCTCCTGGCCCCGACTTTTCCCTGATGGAGACATAACTGCGAATCCCAACCCAGCCGGAGTGGAACATTACCGGCGTTTGATCGGCAAGTTAAAGGAGCTTCAGGTGGAGCCTGTGGTGACTCTGTTTCACTGGGATTTACCGCAGGTCCTGCAGGAGCGCTTCGGAGGCTGGCTGAACCGGAGCATGGTGGACGTCTTCGCAGATTACGCTGCGTTTTGTTTCCAGACGTTTGGTGGGGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000046_00665298_00665879.mRNA True 582 mRNA 0.55 1 665298 665879

Neighbor


gene id symbol gene type direction distance location
CI01000046_00660745_00664133 NA coding downstream 1165 659204 ~ 664133 (-)
CI01000046_00619217_00636285 NA coding downstream 28852 618969 ~ 636446 (-)
CI01000046_00589815_00591549 NA coding downstream 73749 589648 ~ 591549 (-)
CI01000046_00567573_00573618 UBE2KB, UBE2K, UBE2KA, UBE2K.S coding downstream 90248 566913 ~ 575050 (-)
CI01000046_00557959_00566058 CHRNA9 coding downstream 98421 555539 ~ 566877 (-)
CI01000046_00690567_00697727 NA coding upstream 24261 690140 ~ 699872 (-)
CI01000046_00702360_00703954 NA coding upstream 36060 701939 ~ 703954 (-)
CI01000046_00749734_00763064 NA coding upstream 83805 749684 ~ 763481 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S coding upstream 111793 774434 ~ 780293 (-)
CI01000046_00790248_00814884 MKL2B coding upstream 124304 790183 ~ 814884 (-)
G195250 NA non-coding downstream 65348 599140 ~ 599950 (-)
G195249 NA non-coding downstream 66278 598285 ~ 599020 (-)
G195245 NA non-coding downstream 76913 588125 ~ 588385 (-)
G195107 NA non-coding downstream 204773 458527 ~ 460525 (-)
G195124 NA non-coding upstream 4190 670069 ~ 670568 (-)
G195104 NA non-coding upstream 12381 678260 ~ 682667 (-)
G195127 NA non-coding upstream 17816 683695 ~ 684595 (-)
G195268 NA non-coding upstream 38554 704433 ~ 722196 (-)
G195101 NA non-coding upstream 69191 735070 ~ 736556 (-)
G195097 NA other downstream 238972 407423 ~ 426326 (-)
CI01000046_00063416_00065082 NA other downstream 599387 63153 ~ 65082 (-)
G195098 NA other upstream 4857 670736 ~ 676128 (-)
G196463 NA other upstream 1502387 2168266 ~ 2168644 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other upstream 2200380 2866070 ~ 2867794 (-)
G198265 NA other upstream 3091744 3665243 ~ 3800101 (-)

Expression



Co-expression Network