CI01000046_01074910_01076076 (GPER1)


Basic Information

Item Value
gene id CI01000046_01074910_01076076
gene name GPER1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 1074798 ~ 1076424 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_01074910_01076076.mRNA
AGATTGCACTGGATCGAACACGTGTACAGAGCAAAGTGTGCAAAAGAAAAAAAAGAAGCACAATCCCTAAGGAGAGACTCTTGGCGTTGGTGCAATGGATTACACAAGTCCAGGCAGTCTCCATAGCTGAGAGACTGCCCTGAAAATGGAGGTCTTCTACCCTGGCTGCATCTCTGGATTTCTGGATGGCGTCTACCAAACCTTGAGCGTCCACTTGTAAAACACCAATTGTCATCAGAATGCAAATGCAGCCTAAATGAAGGATCCTCTCTACAAAGTGAACTGGGCACTGACACAAATGAAGTATGTAGCACTATTCACAGCATCTAAAACAGAGACTTGGCCAGTATGGAAGAGCAGACTACCACTGTGATTCCGATTTACTTGAATGGCACTGAGCAGTTCAATGCTTCATTTGAATTCAACCTAACCGATGTAAACGAAAGCATAGACACCTATGAGTTTTACGTCATCGGCCTGTTTCTCTCCTGCCTGTACACCATATTCCTATTCCCCATTGGCTTCATTGGCAACATCCTCATTTTAGTGGTCAACCTCAATCACAGGGACAAGATGACCATCCCTGATCTGTACTTCGTCAACCTGGCCGTGGCGGACCTTATTCTAGTGGCGGATTCGCTCATTGAGGTCTTCAATCTCAACGAGAAGTACTACGACTATGCCGTCCTCTGTACCTTCATGTCACTTTTCCTCCAGGTGAACATGTACAGCAGCATCTTCTTCCTGACATGGATGAGTTTCGACCGCTATGTCGCTCTTGCCAGCTCCATTAGCAGCAGTCCGCTTCGAACTATGCAGCACGCCAAACTCAGCTGCAGCCTCATCTGGATGGCCTCCATCCTGGCGACTCTGCTTCCCTTCACCATCGTGCAGACGCAACACACCGGCGAGGTGCACTTCTGCTTCGCCAATGTCTTGGAGATCCAGTGGCTCGAGGTGACGATTGGATTTCTGGTGCCCTTCTCAATCATTGGCCTGTGCTATTCCCTAATTGTCCGCATCCTCATGCGTGCCCAGAAGCACAAGGGACTGTGGCCGCGCCGGCAGAAGGCCCTGCGCATGATCGTGGTGGTTGTGCTGGTGTTCTTTATTTGCTGGCTGCCCGAGAACGTCTTCATTAGCATCCAGCTGCTCCAGGGCACGGCCGACCCATCGAAACGCAGCGACACCACGCTGTGGCACGACTACCCGTTGACCGGGCACATCGTCAACCTGGCTGCGTTCTCCAACAGCTGCCTGAACCCGATCATTTACAGCTTCCTCGGGGAGACTTTCAGGGACAAGCTAAGACTCTTCATCAAGAGGAAGGCCAGCTGGTCGGTGGTCTACCGCTTCTGTAATCACACTCTGGACTTGCACATCCCTGTCAGGGAACTTGATCAAGAAGTGACACGGGTTGACGTAACGAACACTGCTTAATGTTTAAGTCAGCTGGGTGAAATAAGGATTATTTAGGGTGAATCACCTGCTGATGAAGTGGATTACAAGACATGGATGCAGAGGTTGGCCTACAGCAGATAAGTGAAATAAA

Function

symbol description
gper1 Enables estrogen receptor activity and steroid binding activity. Involved in several processes, including cellular response to estradiol stimulus; negative regulation of oocyte maturation; and positive regulation of nitrogen compound metabolic process. Acts upstream of or within heart contraction. Located in plasma membrane. Is expressed in several structures, including blastomere; liver; nervous system; olfactory region; and pleuroperitoneal region. Orthologous to human GPER1 (G protein-coupled estrogen receptor 1).

NR:

description
G protein-cuopled receptor 30

GO:

id name namespace
GO:0005783 endoplasmic reticulum cellular_component

KEGG:

id description
K04246 GPER1, GPR30; G-protein coupled estrogen receptor 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_01074910_01076076.mRNA True 1552 mRNA 0.50 2 1074798 1076424

Neighbor

gene id symbol gene type direction distance location
CI01000046_01047300_01066367 UNKL, UNKL.S coding downstream 8431 1047209 ~ 1066367 (-)
CI01000046_00790248_00814884 MKL2B coding downstream 259914 790183 ~ 814884 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S coding downstream 294612 774434 ~ 780293 (-)
CI01000046_00749734_00763064 NA coding downstream 311317 749684 ~ 763481 (-)
CI01000046_00702360_00703954 NA coding downstream 370844 701939 ~ 703954 (-)
CI01000046_01098117_01099160 GPR146 coding upstream 20834 1097258 ~ 1099160 (-)
CI01000046_01167146_01194022 BAIAP3 coding upstream 90604 1167028 ~ 1194022 (-)
CI01000046_01236373_01241067 UBE2I coding upstream 159568 1235992 ~ 1241067 (-)
CI01000046_01421301_01451701 HS3ST2 coding upstream 344088 1420512 ~ 1451931 (-)
CI01000046_01814833_01858924 NA coding upstream 738380 1814804 ~ 1859010 (-)
G195307 NA non-coding downstream 141190 873108 ~ 933608 (-)
G195333 NA non-coding downstream 171022 903376 ~ 903776 (-)
G195282 NA non-coding downstream 234106 840427 ~ 840692 (-)
G195280 NA non-coding downstream 235095 839364 ~ 839703 (-)
G195403 NA non-coding upstream 8420 1084844 ~ 1085092 (-)
G195412 NA non-coding upstream 43300 1119724 ~ 1119925 (-)
G195421 NA non-coding upstream 66661 1143085 ~ 1143475 (-)
G195422 NA non-coding upstream 67090 1143514 ~ 1143752 (-)
G195426 NA non-coding upstream 74950 1151374 ~ 1151694 (-)
G195098 NA other downstream 398670 670736 ~ 676128 (-)
G195097 NA other downstream 648472 407423 ~ 426326 (-)
CI01000046_00063416_00065082 NA other downstream 1008887 63153 ~ 65082 (-)
G196463 NA other upstream 1091842 2168266 ~ 2168644 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other upstream 1789835 2866070 ~ 2867794 (-)
G198265 NA other upstream 2681199 3665243 ~ 3800101 (-)
G199054 NA other upstream 5020935 6097359 ~ 6097674 (-)
G199014 NA other upstream 5287754 6364178 ~ 6375406 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025670 gper1 coding NC_007114.7 CM002887.2 45756605 ~ 45770089 (+)
bowfin (Amia calva) AMCG00018193 gper1,LOC106601100,LOC106607359,LOC107703333,LOC107579847,LOC107719188 coding CM030135.1 CM030135.1 4094987 ~ 4096066 (-)