CI01000046_05323801_05333193


Basic Information

Item Value
gene id CI01000046_05323801_05333193
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5323498 ~ 5333335 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_05323801_05333193.mRNA
ATATCAAAACAAGAAATGGGGGAAGTAAAATAAAAAAAATAAAATAAAAAAAAAATTAAAGAATAAATCAAAATAAAATAAAATAACCAATTCAATCAGGGGTAAAAATAACATTTACCACTAAGTTTACCATCAGCACAACATGGCCAGGATCATAATGCTGCAAAAAAGAAACACCAATTGGTTAAGCAGGAAGATTGAGGCACAAAGAGAGCGTTCAGGGAATCAACTCCAATCAGTTTTGTGGTCTCTTGCGTTGCTTAAAACTCAGCTTCACAAGACTGTGTCTCTACAGCCAGCATGCTCTGCAGGAGAGGGGGAAGGAGATGGGTCAGGTCAGGTGAGGCTTTCACAAATGGAACTAATCTACTTCCTAAAGCTTGCTAGAAGCTCCAGGATTTTATCTGATCTGGAAAATCTCTTTCACTGCAAACAAACTTCAGACACTCCGTCTGCTCTGTGTATTAAACACAAACAGCTTGATGAAAGGAAGACGACAACCAAGAAAGGACAAAACTCTGATCTTTGGAGTGTCTTGCCAACAGATGGGCGGTGCCAGGGAGCATTCCTAATCTGTCACACACTTGACTTGGCTGGGATGACAACCTCTGGCTATGGCTACTTCCTCTGGGTTCTCCGCAGTGCGAGTTCTAAGAAAGCAGCCAATGGAGTATGTGAAGACAGACCGCAGGATCAAGAGCGCAAGTCCCAGGATCTTTCATTTATCGGCAGTGCAGATGCGCCTGCAAATCAGGCAAATGTGGCCCAGATCCACTGGCCCTGTGGATGGCGTGTCAGGCAGACGTGGGAGGCGGATGGGTTTTGTGGGGGCAAATGGATGAATGCACTAAAATTAAACAGACAGATGAAGAGCAAAAACGCCGAAGAATCCAACAGCAGTGCAAGTGGAGTGAAAACATGTCCATACGAACCTGGCTTTTAAACCCTGGGCTGTCAAAAGAACAGTCAAACGTCACACAAACTGAAGAAACTGGCCAATCTCTACAGCTTTCTACTGGTCACACTGTCTCTTTGATCCACTACATTACCACAGTGAATTCACACATCTACACATCCACTAACTGGCAGTTAATTCATATAAATGATTAAAAAAAAAAAAAAAAAAAAAAATGTTATATTGTCCAAACATATACACTCCCACAAGTAAAGAGTGATGGAGAGTGATGTTATCAACAAAGTAAAAGCAGGAAGTGAGAGAGGGAGTGGAAGGTGGGATTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_05323801_05333193.mRNA True 1246 mRNA 0.42 5 5323498 5333335

Neighbor

gene id symbol gene type direction distance location
CI01000046_05284403_05296928 NA coding downstream 26570 5283991 ~ 5296928 (-)
CI01000046_05274523_05275700 RPS11, RPS11.L, RS11 coding downstream 47798 5274468 ~ 5275700 (-)
CI01000046_05268350_05273119 NA coding downstream 50379 5267577 ~ 5273119 (-)
CI01000046_05249489_05250376 NA coding downstream 72898 5249327 ~ 5250600 (-)
CI01000046_05019723_05021281 ASIC2 coding downstream 302095 5019661 ~ 5021403 (-)
CI01000046_05344388_05350795 NA coding upstream 10567 5343902 ~ 5352165 (-)
CI01000046_05383841_05389838 WNT9B coding upstream 50145 5383480 ~ 5390336 (-)
CI01000046_05539022_05539815 NA coding upstream 205666 5539001 ~ 5539815 (-)
CI01000046_05545427_05560924 FMNL1A coding upstream 212040 5545375 ~ 5561202 (-)
CI01000046_05569660_05573084 PSMC3IP coding upstream 236305 5569640 ~ 5573459 (-)
G198772 NA non-coding downstream 186791 5136479 ~ 5136707 (-)
G198769 NA non-coding downstream 214504 5108582 ~ 5108994 (-)
G198768 NA non-coding downstream 217551 5105683 ~ 5105947 (-)
G198760 NA non-coding downstream 440103 4883080 ~ 4883395 (-)
G198759 NA non-coding downstream 440513 4882771 ~ 4882985 (-)
G198701 NA non-coding upstream 68012 5401347 ~ 5431724 (-)
G198808 NA non-coding upstream 98480 5431815 ~ 5485778 (-)
G198819 NA non-coding upstream 127115 5460450 ~ 5467719 (-)
G198851 NA non-coding upstream 180254 5513589 ~ 5515837 (-)
G198912 NA non-coding upstream 436669 5770004 ~ 5770284 (-)
G198265 NA other downstream 1523397 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 2455704 2866070 ~ 2867794 (-)
G196463 NA other downstream 3154854 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 4543205 774434 ~ 780293 (-)
G195098 NA other downstream 4647370 670736 ~ 676128 (-)
G199054 NA other upstream 764024 6097359 ~ 6097674 (-)
G199014 NA other upstream 1030843 6364178 ~ 6375406 (-)
G199130 NA other upstream 1244645 6577980 ~ 6594210 (-)
G199181 NA other upstream 1493350 6826685 ~ 6830453 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G20167 NA unknown NC_056701.1 CM032070.1 14618994 ~ 14622858 (+)