Gene
RNA
| Item | Value |
|---|---|
| gene id | G195856 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 1653960 ~ 1673720 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU222452 | True | 3934 | lncRNA | 0.36 | 2 | 1653960 | 1673720 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_01421301_01451701 | HS3ST2 | coding | downstream | 202029 | 1420512 ~ 1451931 (-) |
| CI01000046_01236373_01241067 | UBE2I | coding | downstream | 412893 | 1235992 ~ 1241067 (-) |
| CI01000046_01167146_01194022 | BAIAP3 | coding | downstream | 459938 | 1167028 ~ 1194022 (-) |
| CI01000046_01098117_01099160 | GPR146 | coding | downstream | 554800 | 1097258 ~ 1099160 (-) |
| CI01000046_01074910_01076076 | GPER1 | coding | downstream | 577536 | 1074798 ~ 1076424 (-) |
| CI01000046_01814833_01858924 | NA | coding | upstream | 141084 | 1814804 ~ 1859010 (-) |
| CI01000046_01926303_01931836 | NSMCE1 | coding | upstream | 252404 | 1926124 ~ 1932117 (-) |
| CI01000046_01970499_01979300 | NA | coding | upstream | 296271 | 1969991 ~ 1979300 (-) |
| CI01000046_02031809_02034289 | NA | coding | upstream | 357739 | 2031459 ~ 2034289 (-) |
| CI01000046_02171626_02174287 | NA | coding | upstream | 497734 | 2171454 ~ 2174302 (-) |
| G195798 | NA | non-coding | downstream | 118538 | 1535212 ~ 1535422 (-) |
| G195563 | NA | non-coding | downstream | 257396 | 1396212 ~ 1396564 (-) |
| G195455 | NA | non-coding | downstream | 345399 | 1308264 ~ 1308561 (-) |
| G195408 | NA | non-coding | downstream | 350799 | 1289822 ~ 1303161 (-) |
| G195445 | NA | non-coding | downstream | 370632 | 1277508 ~ 1283328 (-) |
| G196405 | NA | non-coding | upstream | 238458 | 1912178 ~ 1912448 (-) |
| G196424 | NA | non-coding | upstream | 288561 | 1962281 ~ 1962515 (-) |
| G196390 | NA | non-coding | upstream | 290007 | 1963727 ~ 1966431 (-) |
| G196373 | NA | non-coding | upstream | 293348 | 1967068 ~ 1968357 (-) |
| G196384 | NA | non-coding | upstream | 294717 | 1968437 ~ 1968699 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 873667 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 977832 | 670736 ~ 676128 (-) |
| G195097 | NA | other | downstream | 1227634 | 407423 ~ 426326 (-) |
| CI01000046_00063416_00065082 | NA | other | downstream | 1588049 | 63153 ~ 65082 (-) |
| G196463 | NA | other | upstream | 494546 | 2168266 ~ 2168644 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | other | upstream | 1192539 | 2866070 ~ 2867794 (-) |
| G198265 | NA | other | upstream | 2083903 | 3665243 ~ 3800101 (-) |
| G199054 | NA | other | upstream | 4423639 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 4690458 | 6364178 ~ 6375406 (-) |
