Gene
RNA
| Item | Value |
|---|---|
| gene id | G196441 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 2118603 ~ 2118818 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223090 | True | 216 | lncRNA | 0.35 | 1 | 2118603 | 2118818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_02031809_02034289 | NA | coding | downstream | 84314 | 2031459 ~ 2034289 (-) |
| CI01000046_01970499_01979300 | NA | coding | downstream | 139303 | 1969991 ~ 1979300 (-) |
| CI01000046_01926303_01931836 | NSMCE1 | coding | downstream | 186486 | 1926124 ~ 1932117 (-) |
| CI01000046_01814833_01858924 | NA | coding | downstream | 259593 | 1814804 ~ 1859010 (-) |
| CI01000046_01421301_01451701 | HS3ST2 | coding | downstream | 666672 | 1420512 ~ 1451931 (-) |
| CI01000046_02171626_02174287 | NA | coding | upstream | 52636 | 2171454 ~ 2174302 (-) |
| CI01000046_02206354_02213335 | GALR2B, GALR2, MCHR2 | coding | upstream | 87529 | 2206347 ~ 2213335 (-) |
| CI01000046_02248205_02252489 | ZFAND2A | coding | upstream | 129145 | 2247963 ~ 2252489 (-) |
| CI01000046_02367173_02382809 | MICALL2 | coding | upstream | 247431 | 2366249 ~ 2383407 (-) |
| CI01000046_02387190_02389852 | NA | coding | upstream | 266237 | 2385055 ~ 2390494 (-) |
| G196439 | NA | non-coding | downstream | 7067 | 2111196 ~ 2111536 (-) |
| G196427 | NA | non-coding | downstream | 111042 | 2005788 ~ 2007561 (-) |
| G196370 | NA | non-coding | downstream | 129381 | 1988061 ~ 1989222 (-) |
| G196384 | NA | non-coding | downstream | 149904 | 1968437 ~ 1968699 (-) |
| G196373 | NA | non-coding | downstream | 150246 | 1967068 ~ 1968357 (-) |
| G196459 | NA | non-coding | upstream | 41948 | 2160766 ~ 2161032 (-) |
| G196464 | NA | non-coding | upstream | 50012 | 2168830 ~ 2169043 (-) |
| G196469 | NA | non-coding | upstream | 61635 | 2180453 ~ 2180748 (-) |
| G196479 | NA | non-coding | upstream | 113120 | 2231938 ~ 2232189 (-) |
| G196500 | NA | non-coding | upstream | 163450 | 2282268 ~ 2282534 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 1338310 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 1442475 | 670736 ~ 676128 (-) |
| G195097 | NA | other | downstream | 1692277 | 407423 ~ 426326 (-) |
| CI01000046_00063416_00065082 | NA | other | downstream | 2052692 | 63153 ~ 65082 (-) |
| G196463 | NA | other | upstream | 49448 | 2168266 ~ 2168644 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | other | upstream | 747441 | 2866070 ~ 2867794 (-) |
| G198265 | NA | other | upstream | 1638805 | 3665243 ~ 3800101 (-) |
| G199054 | NA | other | upstream | 3978541 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 4245360 | 6364178 ~ 6375406 (-) |
