Gene
RNA
| Item | Value |
|---|---|
| gene id | G198013 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000046 |
| NCBI id | null |
| chromosome length | 7063170 |
| location | 3049101 ~ 3049519 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU224740 | True | 419 | lncRNA | 0.37 | 1 | 3049101 | 3049519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000046_02972183_02978771 | LFNG | coding | downstream | 70330 | 2972183 ~ 2978771 (-) |
| CI01000046_02873360_02887683 | SNX8A, SNX8 | coding | downstream | 161418 | 2872981 ~ 2887683 (-) |
| CI01000046_02866255_02867695 | MRM2, FTSJ2 | coding | downstream | 181406 | 2866070 ~ 2867794 (-) |
| CI01000046_02480126_02480593 | PSMG3 | coding | downstream | 567160 | 2479876 ~ 2481941 (-) |
| CI01000046_02458763_02477098 | TMEM184A | coding | downstream | 572003 | 2458472 ~ 2477098 (-) |
| CI01000046_03067420_03068783 | CHST12A, CHST12 | coding | upstream | 17848 | 3067367 ~ 3068783 (-) |
| CI01000046_03080433_03083966 | EIF3B, EIF3BA | coding | upstream | 30914 | 3080433 ~ 3084292 (-) |
| CI01000046_03095399_03129278 | GNA12, GNA12A | coding | upstream | 45434 | 3094953 ~ 3129652 (-) |
| CI01000046_03140684_03161621 | CARD11 | coding | upstream | 90863 | 3140382 ~ 3161621 (-) |
| CI01000046_03606941_03615212 | MMD2, MMD2A | coding | upstream | 557198 | 3606717 ~ 3615212 (-) |
| G198012 | NA | non-coding | downstream | 676 | 3048179 ~ 3048425 (-) |
| G198002 | NA | non-coding | downstream | 32272 | 3016460 ~ 3016829 (-) |
| G197978 | NA | non-coding | downstream | 82125 | 2966752 ~ 2966976 (-) |
| G197976 | NA | non-coding | downstream | 86855 | 2961990 ~ 2962246 (-) |
| G196692 | NA | non-coding | downstream | 273425 | 2775371 ~ 2775676 (-) |
| G198014 | NA | non-coding | upstream | 101 | 3049620 ~ 3049840 (-) |
| G198020 | NA | non-coding | upstream | 8211 | 3057730 ~ 3057946 (-) |
| G198044 | NA | non-coding | upstream | 132566 | 3182085 ~ 3211294 (-) |
| G198190 | NA | non-coding | upstream | 348450 | 3397969 ~ 3398865 (-) |
| G198264 | NA | non-coding | upstream | 493781 | 3543300 ~ 3543526 (-) |
| G196463 | NA | other | downstream | 880457 | 2168266 ~ 2168644 (-) |
| CI01000046_00777923_00780186 | RPC11, POLR3K, POLR3K.S | other | downstream | 2268808 | 774434 ~ 780293 (-) |
| G195098 | NA | other | downstream | 2372973 | 670736 ~ 676128 (-) |
| G195097 | NA | other | downstream | 2622775 | 407423 ~ 426326 (-) |
| G198265 | NA | other | upstream | 708104 | 3665243 ~ 3800101 (-) |
| G199054 | NA | other | upstream | 3047840 | 6097359 ~ 6097674 (-) |
| G199014 | NA | other | upstream | 3314659 | 6364178 ~ 6375406 (-) |
| G199130 | NA | other | upstream | 3528461 | 6577980 ~ 6594210 (-) |
| G199181 | NA | other | upstream | 3777166 | 6826685 ~ 6830453 (-) |
