CI01000047_00701972_00715090 (GCP2, TUBGCP2)


Basic Information

Item Value
gene id CI01000047_00701972_00715090
gene name GCP2, TUBGCP2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 701972 ~ 715090 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_00701972_00715090.mRNA
ATGAGTGAATTCAGAATTCACCATGATGTTAATGAGCTTCTCGGGCTACTTAATGTCCGCGGAGGAGATGGTGCTGAGGTTTATATTGATTTACTGCAGAAGAACAGGACTGGATATGTGACCACTACAGTATCTGCACACAGTGCTAAGGTCAAAATGGCAGAACACTCCAAAACACCTGAAGACTTCTTGAGGAAATATGACGAATTGAAGTCAAAGAATGCACGCAACCTTGATACACTGGTGTATCTGCTCTCCAAACTCACTGAGGATAAAGAGACTTTGAAGTTCCTGCAGCAGAATGCCAAGGAAAGATCGGAAATGTCTGCAAATGCAGCATCCACCACCACCACGTCGTACAGCATTCCTGCAACCAGCAGCAAAATGTCAATGCAAGAACTAGAGGAATTGCGGAAAAAGCTGGGAAATGTCACAGCCAGCTCCAGTGTGCCACAGTCTTCTGAAGCAATCCGTAAAATGCTGAGGGACCGGCATAATAAGAAGAACCCCACTCAGCCGAACCCTGTGTTTCCAAACTGGGTGTATGACCGGCCTGCTCTGATTGGGGATTTCATCACTAGCCCCACCCCAGTGGGAGATCCCGTGGTGGCTATTGGTACAATGCCGCTGGCTGCACAGGAACAAGCTCTGGTTGAGGACCTGCTTTTTGTTTTGATTGGTGTGGATGGGAGAGACATCACAGCTCAGCCTGTGCTTGGCAGACAGAGCCGCTCCTTCATAGTAGATCCTTCCCTCGACACGTCCGTCAAAGAGCTGGTCAACCGGATATTGCCGGTCGCATCTTGTTACTCCACTATCACACGCTTCACAGAGGAGAAGTCATCGTTTGAGTACGGTCAGGTGAATCACGCCCTGACTGCAGCCATGAGGACTCTGATGAAGGAGTATCTCATCCTGGTGACACAGCTGGAGCATCTCCACAGACAGGGCACGCTCTCCCTGCAGAAGCTCTGGTTCTACATACAGCCCACCATGCGCACCATGGAAATCCTGGCCTCCATTGCCACCTCTGTCGACAAGGGTGAGTGTATGGGTGGCTCGACACTCAGCCTGCTTCACGATCGTACATTCAATTACACCGGAGACAGCCAGGCTCAAGAGCTCTGCCTCTATCTGACCAAAGCAGCCAGTGTCCCCTATTTTGAAATACTTGAGAAGTGGATCTATAGGGGCATCATTAAAGACCCATACAGTGAATTCATGGTTGAGGAGCATGAGCTGCAAAAAGAGAAGATTCAGGAGGATTATAATGACAAATACTGGGATCAGAGATACACTATTGTCCAGCACAGGATCCCATCATTCCTTCAGAAAATGGCAGATAAGATTTTAAACACAGGCAAGTATCTGAACGTTGTGCGAGAGTGCGGCCGTGACGTTACCTGTCCAGATGCCAAAGAGGTTCTCTACACACTTAAAGAGAGAGCGTATGTGGAGCAGATCGAAAAAGCATATTACTATGCCAGCAAGGTTCTGCTTGACTTCCTGATGGAGGAAAAGGAGCTTGTTTCACGCCTGAGGTCAATCAAGCATTACTTCTTAATGGATAAAGGAGACTTTTTCGTGCATTTTATGGACCTGACTGAGGAGGAACTGAAGAAGCCGGTTGATGACATCATTCCTCCGCGTTTGGAGGCACTGCTGGAGCTGGCCCTGAGGATGAGCACTGCCAACACAGACCCCTTCAAAGATGATTTAAAGATTGACTTGATGCCCCATGATGTAATCACCCAGCTGTTACGTGTCCTTGCTATAGATACCAAGCAAGAGAAAGCCATCATTAATGCAGAGCCCACAGAGGTGTCACTTAGCGGCCTGGAGGCTTTCTCCTTTGACTACATCGTCAAGTGGCCACTTTCACTCATAATCAACAGGAAAGCCCTGACAAGATACCAGATGCTCTTCAGGCACATGTTCTACTGCAAGCATGTGGAAAGGCTGCTCTGTAATGTGTGGATCAGCAATAAAACAGCTAAGCAATATTCACTTCACTGTGCTAAGTGGTTTGCTGCTGCCTTTGCATTAAGACAACGGATGCTCAACTTTGTTCAGAACATTCAGTACTACATGATGTTTGAGGTTATGGAGCCCACGTGGCACATCATGGAGAACAACCTGAAGTCTGCCTCCAACATTGACGACGTGCTGTGTCATCACACCAGTTTCCTGGATAACTGTCTGAAGGACTGTATGCTCACCAATCCTGAGCTGCTTCGGATCTTCTCCAAGCTCATGTCTGTCTGTGTCATGTTCACCAACTGTATGCAGCGGTTCACTCAGAGCATGAGAATAGACAGCGAGATGAAGGCTGAACGGACAGAAGAGGCAGAGAAAAAAAGACTGGCCTCTAAATTCCTATCTGAGCATGTGGATGCCCTCCAGTCTGACTCAGGGTTTGAGGGGACCATCAGCAAGTTTGACAGTAATTTCAGCACCTTATTGCTGGATCTTTTGGATAAGCTCAGCATCTACAGCACCAATGACTGTGAACACAGCATGATCAACATCATCTACAGGCTGGACTTCAATGGCTTTTACACTGAGAGACTGGAGCGAATGGCCATTGAAAGGAGCCAGAAGACTGCTGCA

Function

symbol description
tubgcp2 Predicted to enable gamma-tubulin binding activity. Predicted to contribute to microtubule minus-end binding activity. Predicted to be involved in meiotic cell cycle; microtubule cytoskeleton organization; and mitotic cell cycle. Predicted to act upstream of or within microtubule cytoskeleton organization. Predicted to be located in cytoplasm and microtubule cytoskeleton. Predicted to be part of gamma-tubulin small complex. Predicted to be active in centrosome and equatorial microtubule organizing center. Orthologous to human TUBGCP2 (tubulin gamma complex associated protein 2).
gcp2 gamma-tubulin complex component 2

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K16569 TUBGCP2, GCP2; gamma-tubulin complex component 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_00701972_00715090.mRNA True 2610 mRNA 0.48 17 701972 715090

Neighbor

gene id symbol gene type direction distance location
CI01000047_00654212_00689092 MYOF coding downstream 12880 653448 ~ 689092 (-)
CI01000047_00620874_00645283 NA coding downstream 56689 620756 ~ 645283 (-)
CI01000047_00611745_00618340 RAC2, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC3B, RAC1.L coding downstream 83632 610742 ~ 618340 (-)
CI01000047_00590846_00598816 UQCRC2B coding downstream 103156 590645 ~ 598816 (-)
CI01000047_00558772_00579870 NA coding downstream 121267 558052 ~ 580705 (-)
CI01000047_00884469_00889027 NA coding upstream 168608 883698 ~ 889027 (-)
CI01000047_00892063_00896561 NA coding upstream 175543 890633 ~ 896561 (-)
CI01000047_01071329_01073839 NRBF2B, NRBF2 coding upstream 355212 1070302 ~ 1073839 (-)
CI01000047_01119401_01120162 ADOA coding upstream 404062 1119152 ~ 1120233 (-)
CI01000047_01175229_01292056 ARID5B coding upstream 459498 1174588 ~ 1292056 (-)
G200404 NA non-coding downstream 170917 530604 ~ 531055 (-)
G200387 NA non-coding downstream 236889 464750 ~ 465083 (-)
G200376 NA non-coding downstream 238881 461430 ~ 463091 (-)
G200372 NA non-coding downstream 242800 458920 ~ 459172 (-)
G200332 NA non-coding downstream 360492 341154 ~ 341480 (-)
G200440 NA non-coding upstream 55413 770503 ~ 770964 (-)
G200457 NA non-coding upstream 64358 779448 ~ 801732 (-)
G200459 NA non-coding upstream 65380 780470 ~ 782343 (-)
G200462 NA non-coding upstream 72284 787374 ~ 787712 (-)
G200468 NA non-coding upstream 100237 815327 ~ 816315 (-)
CI01000047_00519408_00522108 PYYB other downstream 179730 519108 ~ 522245 (-)
G200299 NA other downstream 433937 267530 ~ 268035 (-)
G200472 NA other upstream 118851 833941 ~ 834471 (-)
CI01000047_01708628_01744282 BICC1B, BICC1 other upstream 990978 1706068 ~ 1744282 (-)
G202733 NA other upstream 2417223 3132313 ~ 3133652 (-)
G202944 NA other upstream 3082713 3985342 ~ 3986402 (-)
CI01000047_04213574_04213976 NA other upstream 3498319 4213409 ~ 4214085 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location