CI01000047_05862382_05868129


Basic Information

Item Value
gene id CI01000047_05862382_05868129
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000047
NCBI id null
chromosome length 7523058
location 5861825 ~ 5868679 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000047_05862382_05868129.mRNA
ACACAGTACAGCAGCTGCAAACAAATGACTGCATGATGACTAATTTGTGCTGTCAGGATTGTAAATAATGCCGAAAAAAATGTTGGATAACTTCTTTGACACGATTCAACAATGTTGACATTTCAGGTATAGAAGTATTCTGCTTTAAAAAGTAGATCTGTTGAACAGGGCACACTGAAAAATCCCCTAAATAGTTTGAAAATCCATTTGTTTTAACAAACGATTGCCAAGGGTTGTGCAGGTGGCCTGTGTATGTGAAAGGGCATAGAGACATCTGCCTTCTTCTAAAAATAGTTGGTGTTTGGCATGGTGTATCTTTCTTTACTGTACATAGTCACAGGCTGGATTACCAACCACATCAAAACAACATTTTTTTATAGCAGTTTTTAAATTATTTTTAACTGTGATTGCACAAACTGATATATTTTCTATTTCCTTTTTTGCAGGAATATCACAATGTAATCTCCAATATGTGGTGATGACAATGCAAGAAGTGTCAAGCCAGGTCAATTCTGCATCAGACTGAAGGAACTGGGCAAACACATTCATCATGAGCAACCAGGAGAAGCGTCAAAGGACAAGCATGCAACACCTCCGCTATCTTGATAGCTTTATGGATGAAATAGACCGTGAGGTCATGAGCCTGACGGATCGAGCTTTCAAGAGTCTGTGCATCGGAGATGAAGCAATCTACAATGACTCAGAGTTTTCCCCTTCTCCAGTCAGCTGCCACAAGCCAGTGGTGGAGGACGTCTCAAAAAAGACTCAGGAGAGCTCAGTTTCTGCTGTCAAAAAACTTAATTCTTACCCCCTTAATGGAGCGAATGATTTATTGAGTAGATCAAACAAGTCATCCAAAGACTCTGCACTTTTTGCAGTATTTTCAGCCAAAAAGAACGGTGAGAGCACCAAGATGACAAATGGTGATTCATGGGACAAATCGGCTCTACTCAGCATCCAAAGAGAGCTCTCTGAGTTTTCTTCAGATTACCACAGTTTAACAGCAGTACATCTTTCCCAAGCCAAGAATCATCTAAAATCAGATGAAAAAGGATCTGGCAAGAAATCAAGCAAGGATGTATCGCTTCCCTCGGGAAAATCCTCTAAGTGTAAACACAGCAAAAACAACAAACTGAGAAAACTGAATTCCATCAACTTTTTCCTCCACAGTGAATTCAGTCCGTTCTTGTCATGGAGGGATTTTAATAAATTCTCCATTGGTCAGGAGCACATACCGGAGATTATGTTAAGCAACAGGCGACCTGAATGGTATGATTCACCTCTTTACAAAGAGTTAACTGCGGCACATGGACACTATCAATTAAGTTTCCCCCCATCAGTGGATAAAGAAGTCGAAAAGTGTCCTAAACAAAGTGAGACTCAATCACAGCTTGCATCTGTACAATCCGCAGCACCTAGTGTACCCCCAAAACCAGAGAAAGAGTCCAAGCACATTCAGCATAATATTCCTACAAAGGCCCCTCCGCTTGCCTCTGAACAGAGATGTAATTCAGAAAGGGTGGAACCTTGTGTTCCCTGGCGAAAAAGCAGAAGTAGAGCAAAAAGTGCTGCTCCTGTGGGGCATTCCATCAACTCAGCAAGCGCTGAAGAAGGGAGTGCACAGGCATTTAAAGAAGTGAAGACAATAGAGGACCAGACCTCCGCTAGTTCAACTCCTTTCAGTATTTCACAGCTGTTGACACCAGTGATACCCTCCAGACATGGGACAGGAACCTCAGAGATACTGCTCTCACCCACTACCCTGGAGCTCCCACCACTCCCGGAGAGAGAACTGCATCCGTCACCTGAGATTAAAAGAGAGGGGTACAAATCCATAGCATCAAGCTTGTTGTTCAATCTCAAAGACAATAGAAAACGGGTTAAGACAATGTACAGTCCACCTAAGTTTAAAGGTTTGGATGTGGCAAATCAAAGCAAAGGGTCTCCCCAGCCTGAAGTGTCAAAAGATGGGTTTGAAATACCAGAGATTTCAGGAACTACAACTATTTCATCTGCTCGTCACAAAGCCATCATCTCTCAGATGAGTCCCTTGTTGGAAACTGCAGACACTCAAACTTGCTCTCCTGCAAATGACAGGATGCCAGATGACTATTTGGCATTAAGCCTGCTTCAATCTGGAAAATTAAAATCAAACAGGAGCCCTGCAGCTAACAAGGCATCTTACCCCTCATTACAACTTTACAGAAAAACTAGTCCTGAGGAGATTAATATTAGAGCAAATGCTCAAACTGTGGTTGACACCAGTTCTCAGTCTTTCACAGATAAAGCTAGCAAAGATTGTGACGCAGAGCATAATTTTCCAAGTAAATTGTTTAAAAGTGCAGAGTTGCAAAGCAAAAATAATCCTGTAGAGTCAATGCTAAATGCCCCAAAACCCATTGTAGGTTTACATAGCGAAATGTCTCTTGAAAACAAATCTGGTAAAAGTCTGAGTGTAAGTTTAACAAACCTGGAAGAGCAAGTCATCAGTGATGGTACAAATCAAATTATGGACAGGTTGAAAACTAGAGAAACAGTCAGTGCACAGAAAAGCCCCGTTAAAGACAAGGAACCACACGGAAAGGAGGCAGGAGCAAAGCATGTCTTTTCTGCACGACAGAACAACTACATTAAAAGTCAGAGATTTGTAAGTACAGATGATGATAATCATCGTGATGATAGTTCTAATGCACCGTTGACTATACAGGATAAAAAGGAAAATGACAAATGGTCCAGGCATTCCAAAAATCCAAAAACAAAAGAGATAAGACAAGAGACGCATAATGCAAACACACATAAAGATAAAGTAATGGATGGACCACAATTGAAAGAAAGGGTTCATGTAAGAGGAGAGGCTAACACAGCTAAAGACCAGAGCAGTACAACATCAAAGAGTGGTTTGGAAACTCAAAGAGAGCAAAAAGGAAACTCTGAAACAATGAAAAGAAACATTTCTGAAAAGAGAGCACTATTTGCATCAATGGAACAGGTGCCTAATAAGACAAATGCACCCTTAAAGAAAGAGAATGCTGTTATCGATAAGTACAACCTGGCCAAAATGGCTTTAGAGGAAGTAATTGCTGAACGAGAACAAAGAAAGTTGAAAAGTAAAGAGGTCTCAAATGCAGGACGTTCACTCATTGATATAAAAAGAGTCGATTGTGAAAAACCTCAAGGTGGTAGTGAGTTACCCACCAGTGGAGAGGACCAACTGTCTAGTATGTTCTTGCTGAATGAGAGGGGGAAAAGTGCAAAAGATGGCAAAGGTCAGAATACTGTGTCTGCTTTTAAAACAAACTGGCAGACTGTTCAAACGATGTCAGAAGACATGGCCAAACATGGTGAAAGTCATGTGCCTGAGGTAAAATTAGCCAGGCCCTGTAAGCAGGAAGCATCTATTGGGCAGTGCCAGCATGCAGGACCTATAAAATATGAGAGAGACAGATTGTGCCTAAACAATCAAGAAAGCAACACAGATAATGTCAGCAAGGATGATAAAATATGTCAAAAGAAAGAGTTGAAGAATAAAAATATAAGTCATGCAAAGAAATGCACAAAAACAGCTGATCAATTGAAAAGTAGCAATATTCGCAGTGTGGAACAGTGTGAGGAAGAGTTGGGCGTTAGCTCCTTTAAACCTGAGATACCCCCAAGAAGAGGGAGAAGTAATTCTCAAAGTAATGACAGAGTAGGTGAAAAGAAAGAAAGTAATTTTGACTTTAAAAGAGAAGGTGACACTGCAGTCAAAACTGAGGAAATGGAAAGTAGGGAAGTTAAGAAAGTTCAGTCAAGACAATCAAAGAATCGAGGCCCTGTAAGAGGAAATGTATCGGCTCTGAAAGAGAAATATGACAAAGAAAATAAGGTCAACCTCAAGGATGTTCAGAAAGGTCAGCCTGTTGAAGGTACAAGCTGCGAAAAGCCTACAGAAGAGGGACGCAATGAAAGGGCTGCAAAAGACAAAATTAAACATAAATTTGTTCCACCAAAACTCACAGTCAGTGATCCTGAAAGTGGGACTTATTCCATTATCTACAAGGAGATGGATTCAGAGAGTGAAAGAAAGTCTAACAGCTCCTCTAAAGAATCAGAAAGAGTTGAGGAACATTCAAAGAGGAAACACAGTGTCACCCAAGACTTCCAAAAAGCTATACATGATCTCACAAACAACACAAATGAAGAAATGCAAGACAACAAAGTAAAAACGAATGAGAAGGAGGGGGGTTCTGTAAGTCCGAAGGAGTTCGGAGACAAGCAGAACAAATCCAAAGGTCCTTGTAAAAGCTATGTGAAAGACTTCTTTAGTGGACTTCTTGGAATTTCAAGCTCAGAAAGGGGAAAAAATGTAGATGAACATGAGGAGGAACTCTCTGAAACACTGTCTTCAGAGTCTTTCAAACCCGACAAAGCCAGAAAGGACAGTATCAAAGTATATGATATTCTTGGACAATCTCATACTGTATCCTCATCAAATGGTAAACAAACACATCACAGCAGTCGATCTTCAAACTCATGTGAGCTCTCTCTATTGCATGAATCAGAACAGGGGGCGCAATCACAACCTGAAGAGTTGGTAAATAAAGCAGAGGTCTGCTACATGAAAGACAAAGTTGATGGAAAGATGAAGGAGAATTTCCAGAAACCAACAACAGATTCCTGCTCCTTAAGCAACCATGAAAGTGAGCCAGATGTTTCTCCACCGAGTGATGTGGACAAAAGGGGATGGGTGCAGAGCTTGATTGAGTCAGCTAGAAACTTAACACAAATATCACACAGTCATACTTCCTCTAAGGATCAACCTGAAATAGATCAACAGCTGTCTCAGAAGGACCACTTGAATGGATCTGAGAAAGATAAGCAAGATCTGGACCTCTGCAAGGACTGTGTCCATTCTCCAGTTGCCATACCATCAGTCAAGACCCCCCAACCAAACCAACCAGCAATGCATTTCTTGTCCCTTCCGACAAATCACCTGGTCAAAGAGGGAAAACTGTCCGTTGGAAGTGCCTCTGTGTCTGAGGAGGAGGAGAGGCGCTCTGCTGTGAGCACTTTATCTGAAGGCCTGGACAGCTATGAAACAAGCGGAGGGGATACAATGGAGGAGAACTTCTCTGGCATTGCACCAGCAGAGGATGCGGAGGGATCCAAGGCACCCAGCGAGAGATCTGCTTCAGCCTGCAGCGGAAATGATAGTAATGGTCAGAACAAGCCGCCTGTTGTACCTCCAAAAACTGAAAAGGCTCTACGCCGAGCCATGAAGCTCACCACACGGAGGATACAAAAGGCTGAAGCTAAAAGCAAAACTGAGCGTAAAGGGAGGAGCAGTGACAAAAGTGTCAGTCACAAGGCTGAGAGGAGGCACCACAGCATCGACCAAGTACTTGACAGATCAGAACACAGCAGTGACAGAATCAGCAGTAAACACAGCGAGCATCTCAATGACACAAATGAGCACAAAACTCAAAGAAGCGAGAAGCATGCTAGACGCCATAGTGGTCACAAGAGTCAAATAGAAGAGAATGAACCTAGTAGAAAATTGCAACATGCAACCAAAGACAAAGAAAGACAAACCAGCCAAACTGGTGACTTAAAGGGCCATCGCACTGATGGCACATCAAACCACGGGGATCATTTGGGGAACGGCAATATAAGTAATGACAGTGATCGATTAGGTCGAAGCAATGAGAAACACTTGCCCAAGAAACTGGAACGTAGGACTCAAAGTCTGGATAGATTTCTAAGGGAAAAAAACGAAAACATGTCAAGTAGCACTGTTGGTTTAATAGAAGGATCACAGTACTCTACTCCAAAGGCGTTACCTTTGCGCCAAAACAGCATTGAACATACTTATGCACCAACCACTAATCTTGTAACACAGTCCTTCCCGATCACCCAGAGAAAGCTTTTACAGGACCCTGACTCAGGACAGTACTTTCTGGTGGATATGCCAGTACAGGTCAAAACGAAAACTTTCTTTGACCCAGAAACTAAAAGTTATGTGCAACTGCCAGTACAGTCTCCTGAGGCTGCCGTGCGACAAGCTCCGCCATTGGAGGTTATGAACACGCCACCACTTATGCTGTATCATGGGTTTGTTCCCATGCCCGTGTCATCACAGAAGTCTGTTGTCAGGACTGGAGGATCTATGATTCCTCCCGATGACCTGGAAGACTTTGAACCTAGCAGGAAACAGGAGGACTTTTATCAAATAAATAATGAAGAAGTAAATCCTTACATTGAGCCAGTGTATATATCACAAGAACATACACCTGAAGAGGAAATTGATAGTGTGAGATGACAACATCCAGACTGAACCAGTGGATGGTCTAGAGATTGAATGTGACTGAAATCAGGGATTTGTTTTGTTTGTAGATGAATGCAGTTTTCACCATTTCCAACTTGCAGTCTGGTGTGACATGGAAAAGTTTTTGTAGTATGGATGCTGTTCATTGTTTGTAGTACACAAGACTTGGATTGTAAATGTTTATTTCTTCTTAAAGTAAGGCAATTAGCTAGTTCTCTTACTGTTAAAAGCACTTGTCTATTTGTAACAGCAGGGTTGAGATTTGGATTCGTGCCTTATTGAAAGTAGCTTTGCGTTCATAAAAATATTTGATCATTATTTAACAGATTATTTTGATACATCTTGTATTTGAGGTTTGGAAATACACTAGTCCACAGTATTTTTCACAGCAGAAAAGTATTGTAAAAATTAAGAGATTAACATAGTTAATGTGTTTTATATGCTTAAAATGGTGTATTTGACAAATGCTGATTGCATCACTTTCCAGGGTGCATTTTGGAATGAATCCATTTAAATGGATTGTTGCTTCAGAAAAGAACCATTCCAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000047_05862382_05868129.mRNA True 6855 mRNA 0.41 1 5861825 5868679

Neighbor

gene id symbol gene type direction distance location
CI01000047_05805272_05807974 NA coding downstream 53851 5805272 ~ 5807974 (-)
CI01000047_05546059_05547988 SOX9A coding downstream 313469 5544781 ~ 5548356 (-)
CI01000047_05247473_05248489 SSTR5 coding downstream 613144 5246963 ~ 5248681 (-)
CI01000047_05235089_05236228 SSTR2A coding downstream 625552 5234144 ~ 5236273 (-)
CI01000047_05219313_05222967 NA coding downstream 638835 5219190 ~ 5222990 (-)
CI01000047_05869347_05869519 NA coding upstream 605 5869284 ~ 5869519 (-)
CI01000047_05958264_05971163 MAPK8B, MAPK8, MAPK8A coding upstream 89212 5957891 ~ 5971163 (-)
CI01000047_06139714_06142702 UBTD1, UBTD1A, UBTD1B coding upstream 270938 6139617 ~ 6142702 (-)
CI01000047_06184569_06194319 ZDHHC16 coding upstream 315393 6184072 ~ 6195664 (-)
CI01000047_06216778_06234561 FAM20A coding upstream 346947 6215626 ~ 6235272 (-)
G203764 NA non-coding downstream 57667 5803136 ~ 5804158 (-)
G203720 NA non-coding downstream 207737 5653017 ~ 5654088 (-)
G203719 NA non-coding downstream 208867 5652745 ~ 5652958 (-)
G203713 NA non-coding downstream 217288 5644335 ~ 5644537 (-)
G203712 NA non-coding downstream 218858 5642745 ~ 5642967 (-)
G203853 NA non-coding upstream 107231 5975910 ~ 5976256 (-)
G203857 NA non-coding upstream 112121 5980800 ~ 5981561 (-)
G203858 NA non-coding upstream 114065 5982744 ~ 5983064 (-)
G203859 NA non-coding upstream 115902 5984581 ~ 5984887 (-)
G203861 NA non-coding upstream 123098 5991777 ~ 5992089 (-)
G203286 NA other downstream 985091 4874379 ~ 4876734 (-)
CI01000047_04575184_04576337 GNGT2B, GNGT2 other downstream 1284860 4574335 ~ 4576342 (-)
CI01000047_04285605_04286644 COA3A other downstream 1575144 4285227 ~ 4286694 (-)
CI01000047_04213574_04213976 NA other downstream 1647395 4213409 ~ 4214085 (-)
G202944 NA other downstream 1875423 3985342 ~ 3986402 (-)
G203840 NA other upstream 49829 5918508 ~ 5927344 (-)
G203881 NA other upstream 174574 6043253 ~ 6043789 (-)

Expression


Co-expression Network