CI01000048_00809677_00812096


Basic Information

Item Value
gene id CI01000048_00809677_00812096
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 809677 ~ 813160 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000048_00809677_00812096.mRNA
ATGGCGTACCACGGCAGCACAACTGCGATGCACGAGCACCTCAGAAGAAAGCATCCTGGCGCTCTCCGACCTCAAAAGGACGAGCCATCTGTAAAGAGGCAAAGCTGTGTACAAGATTTCTTTCATAAAAAGCATGTCACTGTTTGCACGCCCCAGATGGCCGTTACACTTACCGATAGCATACTCAACATGATTGTAAAAGATATGAGACCTCTTTCTATTGTAGACGGTCAAGGATTTCGTGAGATGATCAACACGTTTTACCCAGGATACACACTTCCCTCCAGGTCCCATTTCACTAAGCTGATGGAGAAGAAATATGAGGAGAATTTTGAAAGATTGAAAGCGTCACTCAAAGATGTGAAATCAAAAATAGCTCTCACCACAGACGCATGGACCAGCATTGCCACAGGGGCATACTTGGGTGTCACATGCCACTTCATTCATGAAGACTGGGAGCTTACATCGTACAATCTGACCACCATGCCACTTGAAGATCGGCACACAGCTGAAAACATTGCCAACTGGGTGGAAAAAGCAGCTGAGAAGTTTGAGATATCCATGGCCAATGTAATTGTAGTTGTCCATGATAATGCTGCAAATGTTGTCGCTGCTCTGCGTATTTTGGAAGAAAAGCATGGCATCTCTTCTCTCAGGTGTGCTGGTCATACATTGCATTTAGTTGTCAACCATGCCCTGAGGGATCCCCAGATCAGCAAGACACTGAGGGCTGCAAAGTGCCTTGTGGAACATTTTAAAAAAAAATGGAACAGTACTTTACACATGATCAGCCGCCTGCTTGAACAGAGGTGGCCTGTGACTGCAACACTTTTCGATCCTGATGTCACACCACGAGGGAAGCGCTTCCTGGATTTAAAACATGATCAGTGGAGCTTACTTGAGGAAGTGGAACAAGTCCTGAGGCCTTTCGAGTGTGCTACTGTTTTCTTGAGTGGAGAGTCCTATGTGACTGGTTCCGCTCTACCTCCTCTGGTAAAGGGCCTCCAGAAATCCATACAGAGCACAATTTTTGAGACCGCAGCAGTCAAGGCTTTCCAAAGTGTTGCTGCACAGGAGATGACATCAAGATGGGAGCGGGAAACTAAATTCAGAGATGATGGAGAAAATATATGTCTTATTGCAGCAGCCCTGGACCCCAGATTCCGCAAACTAAAATTCCTGCCAGCAGAGGACAGTATAAAAGTTCACCTCAAGGTTCAAGCTCTTGCTCTTGAAGAGAAAAGAAGATATGAGGAGCAAACACATCAACATCAATGTGAGGAACAGGTTCAGTCAGCCAGTGCAGACATGACATTTTCAGAGAAGAGGCAAGTGTCTCTGTTGGACACTTTGCTCGGTTCGGATTCAGATGACCACAGTAATGGTGAGGATGACACTGGTCACATCCAAGATCAAGAAACTCACAGTGAAGTTGTGAGGAATGAGATACACATGTACTTTAGTGAGCAGGCTATTCCAAAGGAAGAAAATCCGCTGAAATGGTGGAAGGAAAATGAAGTGAGGTTTCCCATCTTGGCCATGCTGGCAAAGAGTTACTTGTCTGTGCCTGCAACATCAACCCCATCTGAAAGGCTTTTCTCAGTTGCTGGCAACATTGTGACTAAAAAAAGAGCAAGCCTAACTTCAGAGCATGTCGATATGCTAACCTTCCTCCATTGCAATGCTATATAATTAGTAACACAGGCCCCCAACCTTTTGCACTGTTTATGTTGGGCTGTATTTATGTTGGACTTCTTTAAACTACAAGATGCCTTCAGGTAATCTTTGCACTGTATTGGCCATTAATTTTGCACAGTGTTGAGCAGTGCTTTTGTTGGACTTGGCTCCTTTAAAACTGTTACCTTTCAGGTATGTTTTACATAGTGTTGTTGACCAGTATTTTTGTGGTGTGTTACTACTTTAAACCACATAATGCCTTCAGAATGCATCTTTTGCAAAATGTTAGGCAGAATTTATATGGCATTATTCATGCCTGATGCCCTAAAGTGTTGTTTACATTTTACTTTTTTGGCACTTTATTTTTGTATATGTATTTCATGTATTTTTGCACAGTGTTGAGCAGTGCTTTTGTTGGACTTGGCTCCTTTAAAACTGTTACCTTTCAGGTATGTTTTACATAGTGTTGTTGACCAGTATTTTTGTGGTGTGTTACTACTTTAAACCACATAATGCCTTCAGAATGCATCTTTTGCAAAATGTTAGGCAGAATTTATATGGCATTATTCATGCCTGATGCCCTAAAGTGTTGTTTACATTTTACTTTTTTGGCACTTTATTTTTGTATATGTATTTCATGTATTTTTGCACAGTGTTGAGCAGTGCTTTTGTTGGACTTGGCTCCTTTAAAACTGTTACCTTTCAGGTATGTTTTACATAGTGTTGTTGACCAGTATTTTTGTGATGTGTTACTACTTTAAACCACATAATGCCTTCAGAATGCATCTTTTGCAAAATGTAAGGCAGAATTTATATGGCATTATTCATGCCTGATGCCCTAAAGTGTTGTTTACATTTTATTTTTTGGCACTTTATTTTTGTATATGTATTTCATGTATTTTTGCACAGTGTTGAGCAGTGCATTTGTTTAATTTATATGGCATTTTGAATGCTTTTGAATTAATATGGCATTATTTGTGCCTGATGCTAAAGTGTTGTTTACATTTTATTTTTGCCACTTTACTTTTGTATACAGTAAAAACTTCAACCACATTGAAGTATTTTTTGGAAAAAATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000048_00809677_00812096.mRNA True 2756 mRNA 0.41 3 809677 813160

Neighbor

gene id symbol gene type direction distance location
CI01000048_00713811_00714700 NA coding upstream 94730 713479 ~ 714947 (+)
CI01000048_00705234_00707566 NA coding upstream 102069 704861 ~ 707608 (+)
CI01000048_00693752_00694265 NA coding upstream 115329 693072 ~ 694474 (+)
CI01000048_00659494_00667971 NA coding upstream 140198 659022 ~ 670072 (+)
CI01000048_00567988_00568484 NA coding upstream 240625 567988 ~ 569052 (+)
CI01000048_01003499_01009234 NA coding downstream 189588 1002748 ~ 1010512 (+)
CI01000048_01067628_01068912 NA coding downstream 254206 1067366 ~ 1070343 (+)
CI01000048_01136676_01137044 NHLH2 coding downstream 322652 1135812 ~ 1137372 (+)
CI01000048_01214358_01215546 NA coding downstream 401198 1214358 ~ 1215807 (+)
CI01000048_01224995_01226178 NA coding downstream 411697 1224857 ~ 1226178 (+)
G204635 NA non-coding upstream 24153 776472 ~ 785524 (+)
G204625 NA non-coding upstream 44982 763029 ~ 764695 (+)
G204576 NA non-coding upstream 57729 694934 ~ 751948 (+)
G204573 NA non-coding upstream 119238 689967 ~ 690439 (+)
G204675 NA non-coding downstream 74731 887891 ~ 903087 (+)
G204676 NA non-coding downstream 90717 903877 ~ 904389 (+)
G204704 NA non-coding downstream 123545 936705 ~ 945789 (+)
G204703 NA non-coding downstream 140530 953690 ~ 971594 (+)
G204824 NA non-coding downstream 180472 993455 ~ 993969 (+)
G204472 NA other upstream 448016 361025 ~ 361661 (+)
G204409 NA other upstream 523930 285270 ~ 285747 (+)
G204233 NA other upstream 746080 63188 ~ 63597 (+)
G205026 NA other downstream 569795 1382955 ~ 1383698 (+)

Expression


Co-expression Network