CI01000048_00567988_00568484


Basic Information

Item Value
gene id CI01000048_00567988_00568484
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000048
NCBI id null
chromosome length 1528931
location 567988 ~ 569052 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000048_00567988_00568484.mRNA
CTACAGAAGATCTCCCAGACTTTGCAGAGACCTTTGCAGACGGCGGGACGACACATATCAGCATAATGACAGAGTGGTTTTTTCGCCTCACCGTAGGGAGAGATTCCAGGATTGCTATTCTCCAAAATACTCCACTGCAGTCTGCACTGACTACTATGCGGATGACAGGCGGGGACAACAGAATGACACCATGTCTTACAACAGCTTGTCACTTCAACGACGCAGTCCAAGCACTCATCACAAGCGTGTCACCTTTGAGTAGTATAAAGGTCATCATTACAGATCTCAGCAGCACAGCCTGGATCTTCAGAGTGGTCCACATGGCATCTACCCAGATCATCACAGCCGTCATCAGGGAAACTTCCACTATTGTTTCACCTGTTTCACCACCAGCCCCAAACGAAATCATACAGATGACAAACACAGACACCAGCCGTCCAGAGACTAGACACTGTCCTGCTACAGACATGAAGGACACACATCAATGGCATTGTTGAAGGTACTGACATGCACATCATGATATACACTGGTTCTAGCATTTCATTCATTAATGAAACTACCCGTATGGCAATTCCTTCATTGTGCAAAAGACCACAAAAGACTAATTTCGTTCTGTCAAAGTCTGTAACTGGTCAGAATGTAGATACTCTGGGAACTGTGACTTTTAACCTGAGATTAGCCTAAGCTTGCTTGAGCCATATCCATCTAAGTTGGATGGTATTGCAGTTGCACGCACCCTTACATTAGCTGAAAATGGTCAAACTGTAGTGCGGGTCCTGAATCCAACAAACAGCCCTTTTGTACTGCAATCAGGTATGCATCTTGGTTTACTGGAGTGAACTCCCCCAGTTAATGTTGTTCAGCACTCAGATTCTGTATGCAATGATTCCACCCCTTCTACACAGGTGCTGCCTCTTCCATTTGAGATTCAAAGTGGAAATCTGTCTGACACTCAGGTGAACGAACTGTTGCATGAGTATTGTGACGTGTTTAGAAAGAGCCCTACAGATTTTGGAAGAGCGTATATAGTTACACACAAAATCAATACTGACAATGCAATTCCCA

Function

NR:

description
PREDICTED: retroviral-like aspartic protease 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000048_00567988_00568484.mRNA True 1065 mRNA 0.45 1 567988 569052

Neighbor

gene id symbol gene type direction distance location
CI01000048_00425103_00519682 NA coding upstream 48098 425103 ~ 519890 (+)
CI01000048_00403297_00404487 NA coding upstream 163374 403232 ~ 404614 (+)
CI01000048_00261577_00264226 NA coding upstream 302446 261400 ~ 265542 (+)
CI01000048_00149401_00154452 NA coding upstream 413536 149401 ~ 154452 (+)
CI01000048_00036432_00113057 PSIP1 coding upstream 454931 36432 ~ 113057 (+)
CI01000048_00659494_00667971 NA coding downstream 89970 659022 ~ 670072 (+)
CI01000048_00693752_00694265 NA coding downstream 124020 693072 ~ 694474 (+)
CI01000048_00705234_00707566 NA coding downstream 135809 704861 ~ 707608 (+)
CI01000048_00713811_00714700 NA coding downstream 144427 713479 ~ 714947 (+)
CI01000048_00809677_00812096 NA coding downstream 240625 809677 ~ 813160 (+)
G204504 NA non-coding upstream 5738 561726 ~ 562250 (+)
G204457 NA non-coding upstream 20900 531657 ~ 547088 (+)
G204461 NA non-coding upstream 85740 432327 ~ 482248 (+)
G204459 NA non-coding upstream 97193 467709 ~ 470795 (+)
G204454 NA non-coding upstream 101183 464903 ~ 466805 (+)
G204506 NA non-coding downstream 2695 571747 ~ 572993 (+)
G204505 NA non-coding downstream 3945 572997 ~ 575340 (+)
G204507 NA non-coding downstream 10413 579465 ~ 579735 (+)
G204508 NA non-coding downstream 11035 580087 ~ 580367 (+)
G204509 NA non-coding downstream 12611 581663 ~ 583190 (+)
G204472 NA other upstream 206327 361025 ~ 361661 (+)
G204409 NA other upstream 282241 285270 ~ 285747 (+)
G204233 NA other upstream 504391 63188 ~ 63597 (+)
G204824 NA other downstream 424403 993455 ~ 993969 (+)
CI01000048_01214358_01215546 NA other downstream 645320 1214358 ~ 1215807 (+)
G205026 NA other downstream 813903 1382955 ~ 1383698 (+)

Expression


Co-expression Network