G206696


Basic Information

Item Value
gene id G206696
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000049
NCBI id null
chromosome length 9665442
location 2932480 ~ 2993106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU234565
GTTATATTGCAGCCATTTGCTAAAATCATTTAAGTTCATTTTTTTTCCTCATTAATGTACACACAGCACCCCATATTGACAGAAAAACACAGAATTGTTGACATTTTTGCAGATTTATTAAAAAAGAAAAACTGAAATATCACATGGTCCTAAGTATTCAGACCCTTTGCTCAGTATTTAGTAGAAGCACCCTTTTGATCTAATACAGCCATGAGACTTTTTGGGAAAGATGCAACAAGTTTTTCACACCTGAATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGCTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCG
>TU234564
AAAACACAGAATTGTTGACATTTTTGCAGATTTATTGGGAAGGAGGAACTGAAATATCACATGGTCCTAAGTATTCAGACCCTTTGCTCAGTATTTAGTAGAAGCACCCTTTTGATCTAATACAGCCATGAGACTTTTTGGGAAAGATGCAACAAGTTTTTCACACCTGAATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGCTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU234565 False 392 lncRNA 0.40 2 2932480 2993106
TU234564 True 309 lncRNA 0.44 3 2936436 2993106

Neighbor

gene id symbol gene type direction distance location
CI01000049_02827101_02828949 NA coding upstream 102720 2825830 ~ 2829760 (+)
CI01000049_02732074_02754633 NA coding upstream 177728 2731808 ~ 2754752 (+)
CI01000049_02593696_02606225 NA coding upstream 326210 2593507 ~ 2606270 (+)
CI01000049_02345009_02446004 NLGN4A, NLGN4X, NLGN4 coding upstream 486476 2345009 ~ 2446004 (+)
CI01000049_02238067_02265765 PUDP, HDD1A coding upstream 666114 2237242 ~ 2266366 (+)
CI01000049_02997869_03042673 PRKX coding downstream 4485 2997591 ~ 3042763 (+)
CI01000049_03064154_03077534 NA coding downstream 71048 3064154 ~ 3077997 (+)
CI01000049_03121188_03131739 NA coding downstream 128082 3121188 ~ 3131911 (+)
CI01000049_03133436_03158345 DHRSX coding downstream 140191 3133297 ~ 3158677 (+)
CI01000049_03214802_03219475 CHMP2B.L, CHMP2BA, CHMP2BB, CHM2B, CHMP2B, CHMP2B.S coding downstream 221418 3214524 ~ 3219586 (+)
G206457 NA non-coding upstream 180681 2751548 ~ 2751799 (+)
G206425 NA non-coding upstream 607996 2324226 ~ 2324484 (+)
G206405 NA non-coding upstream 624777 2307421 ~ 2307703 (+)
G206383 NA non-coding upstream 650922 2281281 ~ 2281558 (+)
G206353 NA non-coding upstream 662170 2270003 ~ 2270310 (+)
G206721 NA non-coding downstream 67336 3060442 ~ 3060730 (+)
G206723 NA non-coding downstream 68873 3061979 ~ 3062204 (+)
G206654 NA non-coding downstream 87874 3080980 ~ 3081443 (+)
G206656 NA non-coding downstream 91440 3084546 ~ 3086137 (+)
G206659 NA non-coding downstream 110529 3103635 ~ 3105339 (+)
CI01000049_01840330_01843844 FGF8B other upstream 1088652 1839815 ~ 1844077 (+)
G207888 NA other downstream 630896 3624002 ~ 3624311 (+)
G208074 NA other downstream 884290 3877396 ~ 3882211 (+)
CI01000049_04473766_04475768 GM10043, LSM6, SNRPF, BRAFLDRAFT_125735 other downstream 1480419 4473662 ~ 4476270 (+)
G209660 NA other downstream 3885027 6878133 ~ 6882030 (+)
CI01000049_07219171_07224229 NA other downstream 4225742 7218811 ~ 7224268 (+)

Expression


Co-expression Network