CI01000051_02280290_02283028


Basic Information

Item Value
gene id CI01000051_02280290_02283028
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 2280290 ~ 2283368 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000051_02280290_02283028.mRNA
ATGAGAGAGAGGAGATCTCAGCTTGGCCGTAGCTCCTCTGTCACAGGTGGCTGTTCTGGTTTCTTCATGGGATGGAGGAGGGGCGCTGCCGTCAGCCGCAGAGGCGCGCTGCCCTTGAGCGATGCCAAGGGCAGCTGTTTCTTGCATATCCTCTCAGTGAAAGATGCTATGCTCACATACAAAGAGAGCTTTATCCAAAGGTTACGGCGGATGAGTTCATCCTATAGGGCCTCCTATGAGCGTCTTAGGCCCATATGAAAGAAAGCATGCCAGAAAGATCATGACATTTCCAGAGTGACCTTTACATTGCACTGGAATGACATCAGGAAACTGGATCTAGAACCTCTGCTTTTTTGCAATTATGAAGGATTTTAATACAAGAGGAAGTATGGCTAATTTGGGCTTTTCAATGGCAAGTGCATATTTTGAGTTTCTCTTGATTAAACCAATCGACTTCATTGTATTAACTCAAATTTTTAATTTCAATGAACTCAAAATTTTAAGGCAACCAGGTAACTTAATTTTTTAAAATGATAAACCAACAATTCCTTTTTTATAGTGTACAAATTTATGGTTTTGTAATTAAATACTATGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000051_02280290_02283028.mRNA True 598 mRNA 0.41 3 2280290 2283368

Neighbor

gene id symbol gene type direction distance location
CI01000051_02060996_02061735 NA coding upstream 217935 2060534 ~ 2062355 (+)
CI01000051_01976321_01985259 PCSK9 coding upstream 294131 1976080 ~ 1986159 (+)
CI01000051_01965924_01969562 NA coding upstream 310688 1965703 ~ 1969602 (+)
CI01000051_01945810_01948306 NA coding upstream 331804 1945810 ~ 1948486 (+)
CI01000051_01765268_01780393 NA coding upstream 497876 1765035 ~ 1782414 (+)
CI01000051_02285060_02291993 NA coding downstream 771 2284139 ~ 2292273 (+)
CI01000051_02332216_02342649 PRKAA2 coding downstream 48848 2332216 ~ 2345195 (+)
CI01000051_03014282_03014572 NA coding downstream 730309 3013677 ~ 3014761 (+)
CI01000051_03022303_03035625 TMED5 coding downstream 738126 3021494 ~ 3035855 (+)
CI01000051_03038457_03041581 PIGC coding downstream 753484 3036852 ~ 3042733 (+)
G218215 NA non-coding upstream 49021 2231062 ~ 2231269 (+)
G218200 NA non-coding upstream 71502 2208530 ~ 2208788 (+)
G218197 NA non-coding upstream 75157 2204812 ~ 2205133 (+)
G218150 NA non-coding upstream 100765 2121922 ~ 2179525 (+)
G218149 NA non-coding upstream 158706 2121280 ~ 2121584 (+)
G218271 NA non-coding downstream 86788 2370156 ~ 2411944 (+)
G218237 NA non-coding downstream 212186 2495554 ~ 2557151 (+)
G218342 NA non-coding downstream 291023 2574391 ~ 2574605 (+)
G218862 NA non-coding downstream 557428 2840796 ~ 2841055 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 1555586 637590 ~ 720669 (+)
G217075 NA other upstream 1896162 324465 ~ 384128 (+)
G218981 NA other downstream 962075 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 2091042 4372658 ~ 4393677 (+)
G219803 NA other downstream 2631606 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 4542431 6825895 ~ 6830637 (+)
G221319 NA other downstream 5058673 7342041 ~ 7342546 (+)

Expression


Co-expression Network