G218862


Basic Information

Item Value
gene id G218862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 2840796 ~ 2841055 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248217
GACAGAGGAGCCTCTTAAAGAACAAGTTACAGGTCTGTGAGAACCAGAAATCTTGCTTTTTTGTAGGTGACCAAATACTTATTTTACAGAGGAATTTACCAATTAATTCATTAAAAATCCTACAATGTAATTTCCTGGATTCTTTCCCCCATTCTGTCTCTCATAGTTGAAGTGTACCTATGATGAAAATTACAGGCCTCTCTCATCTTTTTAAGTGGGAGAACTTGCACAATTGGTGGCTGACTGAATACTTTTTTGCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248217 True 260 lncRNA 0.37 1 2840796 2841055

Neighbor

gene id symbol gene type direction distance location
CI01000051_02332216_02342649 PRKAA2 coding upstream 497583 2332216 ~ 2345195 (+)
CI01000051_02285060_02291993 NA coding upstream 548523 2284139 ~ 2292273 (+)
CI01000051_02280290_02283028 NA coding upstream 557428 2280290 ~ 2283368 (+)
CI01000051_02060996_02061735 NA coding upstream 778441 2060534 ~ 2062355 (+)
CI01000051_01976321_01985259 PCSK9 coding upstream 854637 1976080 ~ 1986159 (+)
CI01000051_03014282_03014572 NA coding downstream 172622 3013677 ~ 3014761 (+)
CI01000051_03022303_03035625 TMED5 coding downstream 180439 3021494 ~ 3035855 (+)
CI01000051_03038457_03041581 PIGC coding downstream 195797 3036852 ~ 3042733 (+)
CI01000051_03107566_03109607 ITPA coding downstream 266511 3107566 ~ 3109730 (+)
CI01000051_03128080_03133290 NA coding downstream 287025 3128080 ~ 3133321 (+)
G218342 NA non-coding upstream 266191 2574391 ~ 2574605 (+)
G218237 NA non-coding upstream 283645 2495554 ~ 2557151 (+)
G218271 NA non-coding upstream 428852 2370156 ~ 2411944 (+)
G218215 NA non-coding upstream 609527 2231062 ~ 2231269 (+)
G218877 NA non-coding downstream 21671 2862726 ~ 2863010 (+)
G218884 NA non-coding downstream 50828 2891883 ~ 2892118 (+)
G218886 NA non-coding downstream 61953 2903008 ~ 2903303 (+)
G218889 NA non-coding downstream 67450 2908505 ~ 2908757 (+)
G218926 NA non-coding downstream 118300 2959355 ~ 2961485 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2116092 637590 ~ 720669 (+)
G217075 NA other upstream 2456668 324465 ~ 384128 (+)
G218981 NA other downstream 404388 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 1533355 4372658 ~ 4393677 (+)
G219803 NA other downstream 2073919 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3984744 6825895 ~ 6830637 (+)
G221319 NA other downstream 4500986 7342041 ~ 7342546 (+)

Expression


Co-expression Network