Gene
RNA
| Item | Value |
|---|---|
| gene id | G218572 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000051 |
| NCBI id | null |
| chromosome length | 8436717 |
| location | 1669731 ~ 1669947 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU247909 | True | 217 | lncRNA | 0.28 | 1 | 1669731 | 1669947 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000051_01644907_01652696 | MCM3L, MCM3 | coding | downstream | 17012 | 1644800 ~ 1652719 (-) |
| CI01000051_01560871_01627451 | TRAPPC8 | coding | downstream | 42066 | 1560828 ~ 1627665 (-) |
| CI01000051_01528013_01535266 | OPN7A | coding | downstream | 134465 | 1527909 ~ 1535266 (-) |
| CI01000051_01511542_01512516 | NA | coding | downstream | 157177 | 1511143 ~ 1512554 (-) |
| CI01000051_01468663_01486168 | B4GALT5, B4GALT6 | coding | downstream | 182559 | 1468419 ~ 1487172 (-) |
| CI01000051_01716468_01720230 | NA | coding | upstream | 46512 | 1716459 ~ 1720908 (-) |
| CI01000051_01785489_01787612 | IGFBP1A | coding | upstream | 114535 | 1784416 ~ 1787760 (-) |
| CI01000051_01789888_01790134 | NA | coding | upstream | 119814 | 1789761 ~ 1790134 (-) |
| CI01000051_01809480_01841801 | ADCY1A | coding | upstream | 139533 | 1809480 ~ 1841801 (-) |
| CI01000051_01852579_01861297 | NA | coding | upstream | 182477 | 1852424 ~ 1861883 (-) |
| G218571 | NA | non-coding | downstream | 10 | 1669267 ~ 1669721 (-) |
| G218569 | NA | non-coding | downstream | 2901 | 1666487 ~ 1666830 (-) |
| G218568 | NA | non-coding | downstream | 3805 | 1665704 ~ 1665926 (-) |
| G218558 | NA | non-coding | downstream | 123865 | 1545630 ~ 1545866 (-) |
| G218532 | NA | non-coding | downstream | 178852 | 1490663 ~ 1490879 (-) |
| G218573 | NA | non-coding | upstream | 4504 | 1674451 ~ 1674681 (-) |
| G218575 | NA | non-coding | upstream | 9034 | 1678981 ~ 1679296 (-) |
| G218464 | NA | non-coding | upstream | 12963 | 1682910 ~ 1683268 (-) |
| G218576 | NA | non-coding | upstream | 13993 | 1683940 ~ 1684263 (-) |
| G218454 | NA | non-coding | upstream | 18474 | 1688421 ~ 1689211 (-) |
| CI01000051_00560810_00563417 | NA | other | downstream | 1102576 | 560768 ~ 563417 (-) |
| CI01000051_00394082_00407612 | MTMR9 | other | downstream | 1263936 | 392720 ~ 407612 (-) |
| CI01000051_00278614_00302552 | NA | other | downstream | 1387102 | 278192 ~ 304373 (-) |
| CI01000051_00224709_00227613 | NA | other | downstream | 1426705 | 224507 ~ 227613 (-) |
| G218728 | NA | other | upstream | 857396 | 2527343 ~ 2546459 (-) |
| G218861 | NA | other | upstream | 1170323 | 2840270 ~ 2840632 (-) |
| CI01000051_02955633_02960400 | SCRN2 | other | upstream | 1289641 | 2955380 ~ 2961148 (-) |
| G220041 | NA | other | upstream | 2485783 | 4155730 ~ 4158103 (-) |
