G218987


Basic Information

Item Value
gene id G218987
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000051
NCBI id null
chromosome length 8436717
location 3050219 ~ 3050445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU248365
GACCTTAACATTTTTTGACAGTTTTTGTATTTACAAAGTACCTACATACTTTCACTAAGGTGTTCCTTCAAATGTAAATATGTTTGCCTGTGTGATTGAGCGATGACATCTGTTGAAGTTAAAGTTCTTTTTTCCTTCACACTCAAGCCCACATGTTCATGTTGTGTGGAGACAGCAGTTTCTGTGATCTAGTGCTGTAGTTTTGGGACCGGTGAGCACGTGGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248365 True 227 lncRNA 0.40 1 3050219 3050445

Neighbor

gene id symbol gene type direction distance location
CI01000051_03038457_03041581 PIGC coding upstream 7486 3036852 ~ 3042733 (+)
CI01000051_03022303_03035625 TMED5 coding upstream 14364 3021494 ~ 3035855 (+)
CI01000051_03014282_03014572 NA coding upstream 35458 3013677 ~ 3014761 (+)
CI01000051_02332216_02342649 PRKAA2 coding upstream 707006 2332216 ~ 2345195 (+)
CI01000051_02285060_02291993 NA coding upstream 757946 2284139 ~ 2292273 (+)
CI01000051_03107566_03109607 ITPA coding downstream 57121 3107566 ~ 3109730 (+)
CI01000051_03128080_03133290 NA coding downstream 77635 3128080 ~ 3133321 (+)
CI01000051_03147600_03152676 MYOC coding downstream 96789 3147234 ~ 3153094 (+)
CI01000051_03431193_03432454 JUN coding downstream 379846 3430291 ~ 3432788 (+)
CI01000051_03435613_03439371 NA coding downstream 385168 3435613 ~ 3439851 (+)
G218986 NA non-coding upstream 815 3048636 ~ 3049404 (+)
G218984 NA non-coding upstream 5141 3044796 ~ 3045078 (+)
G218891 NA non-coding upstream 9301 3039603 ~ 3040918 (+)
G218930 NA non-coding upstream 76151 2973148 ~ 2974068 (+)
G218927 NA non-coding upstream 87692 2962196 ~ 2962527 (+)
G218988 NA non-coding downstream 237 3050682 ~ 3050884 (+)
G218989 NA non-coding downstream 1435 3051880 ~ 3052784 (+)
G218992 NA non-coding downstream 20848 3071293 ~ 3073296 (+)
G219015 NA non-coding downstream 46379 3096824 ~ 3097789 (+)
G219019 NA non-coding downstream 73252 3123697 ~ 3123940 (+)
CI01000051_02060996_02061735 NA other upstream 984136 2060534 ~ 2062355 (+)
CI01000051_00638200_00720543 CDC42BPB other upstream 2325515 637590 ~ 720669 (+)
G217075 NA other upstream 2666091 324465 ~ 384128 (+)
G218981 NA other downstream 194998 3245443 ~ 3246873 (+)
CI01000051_04374052_04393328 NA other downstream 1323965 4372658 ~ 4393677 (+)
G219803 NA other downstream 1864529 4914974 ~ 5052033 (+)
CI01000051_06825895_06830637 NA other downstream 3775354 6825895 ~ 6830637 (+)
G221319 NA other downstream 4291596 7342041 ~ 7342546 (+)

Expression


Co-expression Network