G223644


Basic Information

Item Value
gene id G223644
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000052
NCBI id null
chromosome length 3494004
location 1769954 ~ 1770184 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU253679
GAACTTGAGAGAGGAAATGTCATTGCTAGCAATGCAGGCCTCACTGAGCCATCGGATTTCAAAAAAAATATCTTAATTTGTGTTCTGAAGATGAACAAAGGTCTTACGGGTGTAAAACGGCACAAGGGTGAGTAATAAATTACATTATTTTCGTCATGTAATTTGAAATCAGTAACTGACTACAATTTGTAAGTAATCTACCCAACACTGTACGCGTTATACCTTTATATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253679 True 231 lncRNA 0.36 1 1769954 1770184

Neighbor

gene id symbol gene type direction distance location
CI01000052_01709380_01717983 EPS8L3B coding upstream 51916 1709380 ~ 1718038 (+)
CI01000052_01698030_01702872 ATP5F1 coding upstream 66466 1697390 ~ 1703488 (+)
CI01000052_01646159_01681413 NA coding upstream 88537 1645136 ~ 1681417 (+)
CI01000052_01605314_01607566 NA coding upstream 162046 1603790 ~ 1607908 (+)
CI01000052_01550561_01556654 STK38, STK38A coding upstream 212944 1550561 ~ 1557010 (+)
CI01000052_01775176_01778348 GNAT2.S, GNAT2 coding downstream 4992 1775176 ~ 1778576 (+)
CI01000052_01842187_01843668 AMIGO1 coding downstream 71145 1841329 ~ 1844325 (+)
CI01000052_01863516_01880476 SORT1B coding downstream 92954 1863138 ~ 1880982 (+)
CI01000052_01887034_01894583 NFYA coding downstream 116798 1886982 ~ 1894583 (+)
CI01000052_01896445_01921839 AHCYL1 coding downstream 124635 1894819 ~ 1921969 (+)
G223643 NA non-coding upstream 95 1769541 ~ 1769859 (+)
G223635 NA non-coding upstream 31484 1738234 ~ 1738470 (+)
G223630 NA non-coding upstream 56581 1713072 ~ 1713373 (+)
G223629 NA non-coding upstream 61656 1707644 ~ 1708298 (+)
G223620 NA non-coding upstream 127838 1641443 ~ 1642116 (+)
G223663 NA non-coding downstream 58217 1828401 ~ 1828716 (+)
G223690 NA non-coding downstream 196959 1967143 ~ 1967362 (+)
G223691 NA non-coding downstream 210269 1980453 ~ 1999545 (+)
G223714 NA non-coding downstream 229482 1999666 ~ 1999908 (+)
G223718 NA non-coding downstream 233243 2003427 ~ 2003679 (+)
G223545 NA other upstream 499027 1270492 ~ 1270927 (+)
G223694 NA other downstream 279142 2049326 ~ 2104299 (+)
G224953 NA other downstream 1660952 3431136 ~ 3460136 (+)

Expression


Co-expression Network