XLOC_009782


Basic Information

Item Value
gene id XLOC_009782
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 14153990 ~ 14158725 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00021904
CTGATGTTCGTTTTACTCCAGTTGAGCAAGACTCCATCAACAAGCTTCCAGCTGTCATTAAGTTTCTAGCAGCACACTGAACTTCACCAACACTCCTTTGGGCTGTCATTTGACTAAATGAAGTGCTAGCAAGATTGCTGTTCCTCAGGAAAGTGTGATGTTGGATGCTTCTGTCAACTGGCGGGGGTGATGGTTGATCTTCATCAATTTCATCCTCATCCTCCTGGTATCCTGTTCCACCTTCCTGGATTGAGCCTCTGTTCTTCGACTCTACCTGAACACTCTCTCTCCACCTCCATGGCTGCCGATGCTCTGCCCACCTCACTTTTGAAATTGGTCTTAGGTGCGCAGGTCCGATATATGAAAGCGGTGAAGTTTTGTGTTTGTCAGCTTGTTTTGAGGGTGCTGAGGTAGAGCATTGGTAATCTGTTGACAGACCTAGTCCCCTTCTGAAATGGTCTTTTCTAGGGTTACTTCGTCCAAGCAAACCGCCTAGTCCTTCTCTTTCTCTAAACCTATCATCCACAAATCTTTTATCTCTACCTTGCTCTCTGTCATCTTCTCTTTGCCAGCTATTTCTACTGAACCAGTCACTAGAGGAATGAGATGTTAGATTAGTGTAAGTCCCATGTGGCTTCCCATGACAAACTTCAGATTCACGCCTTAGAAATTTGTGCTTCCTTTTATGGAACTTTGATGGGCTTAAAATTGGATTTTTGGAGTAGGGATGTACATATGAGGGTAAAAATGGTGATGAGGGGTAAATAGTTGCAGATGGAGGGTATCCTCTATAGAGTCCAAAACCAAACGAAGTGGTAGGAAGAGGCATTTTGTAGGGCGAGTGGTAACAACCACCTGCTGACAGTGGGAAGCCAAGTTTATGTACTACTGGACAATGAGTGACAATATGTTCACCTGGTTGTGAGGGGCAGCCATTGTTCCTTTTAAAATCTGCCAAGCCAACATAATGCAGAGAGTCACGAGAAAATTCTGACTGAGGAGAGTAGTAACCACTGAAGTTGATTTGAAACATAGTTGGATGGTGAAGGTTTTGCGGCAGACACTTTAGAACGTGAGGGTGAGCTTTGCCCTTCCCACTCTTTCTTCCTGATTTTGCTTCATCCCCACAACCCCGAGATGAAAGATGATGCACAATATGAATTTCACTAAGCCTGACCACTAACTCCTCAACCTCTGCCAGAAATGCTGGGTCTTGCCGTTTGGCCCTGAGTTGAAGATACTTTTTCTTGCATTTGTGTTTATGTCTCCTAATCTTATCGTGGCTAAAGCAATTATGTCCTTTTCTATGACACTTGTATTTGAGCCTTTCTTGCTCCATCAGGACTGATCGTGCAAGGTGTGTTGCTCTGTGATTTTGAATCCTTACAGAACCTAACTGTGATGTGGCTGAAGGGCAAGGTGCTGGCTGTGAAGAGGTGGGATGTTTAGATTTCTCTTCAGGCAATGCTTTAAACTTTTGGGAATTTGTTACCTTTGGAGAAGAATGTTGATCATATTTACGGTTGCCAGGATAAAGTTTTCTCCGGAAAGAACTAATACTAGAAGAAGAGGGTTTGAGTTGTTTAAATGAATAGGGGGAGTTGTGCAAAGCAGTTTGGCCATCAAATGAATGACTCTGTTCACCAGAGGTGGACCAATTTAACTGATTTGAAGATTCTGTTGAGACTTGCGGAGTCTTTGGACTCTGAACTTGGTCCGAGTCTTGGCCAAAAGTTTCCCTTTGAGCTTTAGGTTTACGACCTCTTCTTTTTCCTATGTAGATTGTCCCACGTTTGCTGACGTTAATTTGAGGACCAAGTTTCCCCCCAAAAGATGTAACAAGTGAGGATAAAGATTGTGCACTTTCGGACACTGAACATTCGGCATCCCCTTTATTGTCTTTTTGAGCCAAATCAGTTGTGCAAGTTTGGCTTTGCCCTGATAGAAACTGCGTGAGTACTTTATCTTTCCTCTTCACTCTcattttgttgatatttttgaTAATTGACCTCATTATTAACCTATTTCGTTTGCGGCAGATTTGTGCATCTCTAGCTCTGGACACTGAAGGTTTGAGTTTTCCTTCAGCACCTGTCTTTCCTGATGCTAAGTGTAGTGATTTAGATTTTTTAGTCTGAGCAGACAGGGAACATTTTGGATGGCTTTGTATTTTGGGTGTTGGATTTGGGAGTTTCAAGCCATCTTCTGGCCTAGGGACATTTGAGTGCTCAAGTATAGAGAACTTAGTAGAAGACTGCTGAGACTTACTTCCCTGAGGAGACTCATCCATCCTAGTTATTTTTGGTCGACCCCTTCTCTTAGTAGGGACCTCAATGAACGCGCTTTCTGATCTTGGGGATGTTTTTTGTAGTTCTTTTGATTTAAGAGGTTGTCTGACTGGGTCTTGTTTACCCTGCTTTGATGGCAATTTCTTCAAGGACTTCATGGAAAGATCTCTTTTACCTTTTGATTTTTGAGGTATAATTTTACAGGCAGTGGGATTAACATTAGAAGCTCCCAAATCCATATTCTCCCCCTGATTTACTATATTTGAAATCTGAACAGATTTTTGTGTCCTTTGTGAAATGGTGTCTTGTTTGGGGTGTAAGGGTGGCTCTTCACTTTGAGCAGAACTGTTAAACTGAGAATCTGCACAGCTGGGAGTTCGAGGGGAACATTTCACATTTTCTTCCTGATTTGAACTACGCCtagttcttttctttttcttttcaatgacatgcCCCTCTCTGCTGACATCTTTTGACTGCACAGCAACAGTTTGAGCCGGTTCCATAGTCACTTTTTGGGAGTCATCTATGACTTCACTTCCACTGTGCTTCTTGCACCTTTCTCTGTTCTCCGGTAACTCTGGTACACTAGTGCTGTTCTCAGAAGTTGCTGATTCTGCAGATTTATCTGTGGCAGGAGGAAGCAATGGTGCATTGACAGAGGGACTAGGCTGATGCAGTAAACCATTTTCTCTACTCCTATTGTTAGTATTGTTGCTAGACATGTTTTTGGAAGATGCATAATCACCATCCTCTTTCTCATTTGCAATCAAAACCCTGTCAACATTTGTCTCCCGTGTTCTAGAAGTCTTTTTTGGAGGACGGAGAGTTTGCCTTAGAGAATTCTCACTACATCTTTTTGGAGATGACTTGCTTTCATGGTGAGTTTCAAGGCTGGAAGAAGACTGCTGAGATATCTGAGTGTTCTGTGTCATATTCTTTGAGCTATCTGAACTAGGGGAGGAGGTCATTGCTTCCTCAGTCGGGAGATCATCACTCTTTTCTTTTTGAGCATTTAAAACTTGTGTGCTGTCTTGTAGACTGGAGTTTTGTTGTAATGAGGAAGGCGGCGAAGGTGCAGCTGGAGGGGAATGCGTCTGCTTCAAAAAGGAAATGTTGTGTTTTTCAGTCTTATTAATACTCTTCTGTCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00021904 True 3439 lncRNA 0.43 2 14153990 14158725

Neighbor

gene id symbol gene type direction distance location
XLOC_009781 si:dkey-85k15.11 coding upstream 62145 14078748 ~ 14091845 (+)
XLOC_009780 rusc1 coding upstream 98681 14029283 ~ 14055309 (+)
XLOC_009779 zgc:162509 coding upstream 128894 13993285 ~ 14025096 (+)
XLOC_009778 zgc:162509 coding upstream 177055 13965923 ~ 13976935 (+)
XLOC_009777 NA coding upstream 199843 13950017 ~ 13954147 (+)
XLOC_009783 dap3 coding downstream 42676 14201401 ~ 14215617 (+)
XLOC_009784 gba coding downstream 57856 14216581 ~ 14231312 (+)
XLOC_009785 polr3c coding downstream 90821 14249546 ~ 14280600 (+)
XLOC_009786 NA coding downstream 302537 14461262 ~ 14493478 (+)
XLOC_009787 NA coding downstream 316131 14474856 ~ 14481801 (+)
XLOC_009776 NA non-coding upstream 208414 13942073 ~ 13945576 (+)
XLOC_009769 NA non-coding upstream 539802 13612654 ~ 13614188 (+)
XLOC_009768 NA non-coding upstream 652025 13499361 ~ 13501965 (+)
XLOC_009766 NA non-coding upstream 981292 13168872 ~ 13172698 (+)
XLOC_009788 BX324006.1 non-coding downstream 320435 14479160 ~ 14484367 (+)
XLOC_009789 BX005402.1 non-coding downstream 320826 14479551 ~ 14508200 (+)
XLOC_009791 NA non-coding downstream 463799 14622524 ~ 14622765 (+)

Expression


Co-expression Network