G226200


Basic Information

Item Value
gene id G226200
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000053
NCBI id null
chromosome length 7014373
location 2844813 ~ 2845491 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU256638
ACGACCATTGACACCTTGCACAAGGAGGGCAAGACACAAAAGGTCATTGCAAAAGAGGCTGGCTGTTCACAGAGCTCTGTGTCCAAGCACATTAATAGAGAGGTGAAGGGAAGGAAAAGATGTGGTAGAAAAAAAGTGTACAAGCAATAGGGATAACCGCACCCTGGAGAGGATTGTGAAACAAAACCCATTCAAAAATGTGGGGGAGATTCACAAAGAGTGGACTGCAGCTGGAGTCAGTGCTTCAAGAACCACTACGCACAGACGTATGCAAGACATGGGTTTCAGCTGTCGCATTCCTTGTGTCAAGCCACTCTTGAACAACAGACAGCGTCAGAAGCGTCTCGCCTGGGCTAAAGACAAAAAGGACTGGACTGCTGCTGGGTGGTCCAAAGTTATGTTCTCTGATGAAAGTAAATTTTGCATTTCCTTTGGAAATCAGG

Function

NR:

description
rho guanine nucleotide exchange factor 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256638 True 443 lncRNA 0.47 2 2844813 2845491

Neighbor

gene id symbol gene type direction distance location
CI01000053_02645463_02689522 SYNRG coding upstream 155291 2645463 ~ 2689522 (+)
CI01000053_02616165_02625025 HNF1B, HNF1BA coding upstream 218927 2615940 ~ 2625886 (+)
CI01000053_02594164_02594541 DYNLL6, DYNLL1, DYNLL2A, DYNLL2, BRAFLDRAFT_114344, DYL1, DYNLL1.S, BRAFLDRAFT_130244, DYNLL1.L coding upstream 250006 2592558 ~ 2595467 (+)
CI01000053_02586997_02590591 SRSF1, SRSF1B coding upstream 253797 2586997 ~ 2591016 (+)
CI01000053_02582319_02585623 ALDOCB, ALDOC, ALDOCA coding upstream 258746 2582243 ~ 2586067 (+)
CI01000053_02891966_02895382 HSPA13, STCH coding downstream 45837 2891328 ~ 2895638 (+)
CI01000053_02958353_02962208 SERPINH1, SERPINH1B, HSP47 coding downstream 112862 2958353 ~ 2962817 (+)
CI01000053_02989765_02990808 TSKU coding downstream 144274 2989765 ~ 2992169 (+)
CI01000053_02999291_03000591 NA coding downstream 153344 2998835 ~ 3000931 (+)
CI01000053_03068131_03069156 NA coding downstream 222547 3068038 ~ 3069249 (+)
G226181 NA non-coding upstream 30147 2814398 ~ 2814666 (+)
G226173 NA non-coding upstream 65707 2778762 ~ 2779106 (+)
G226172 NA non-coding upstream 66154 2777977 ~ 2778659 (+)
G226164 NA non-coding upstream 82363 2761649 ~ 2762450 (+)
G226163 NA non-coding upstream 83304 2760883 ~ 2761509 (+)
G226216 NA non-coding downstream 28423 2873914 ~ 2874165 (+)
G226284 NA non-coding downstream 151236 2996727 ~ 2997054 (+)
G226253 NA non-coding downstream 161691 3007182 ~ 3008378 (+)
G226261 NA non-coding downstream 166172 3011663 ~ 3013802 (+)
G226268 NA non-coding downstream 185712 3031203 ~ 3064135 (+)
G225952 NA other upstream 971518 1872874 ~ 1873295 (+)
G226292 NA other downstream 191111 3036602 ~ 3046783 (+)
G226347 NA other downstream 426883 3272374 ~ 3274911 (+)
G226399 NA other downstream 775307 3620798 ~ 3697529 (+)
G227317 NA other downstream 1569460 4414951 ~ 4415593 (+)
G228257 NA other downstream 2530062 5375553 ~ 5378449 (+)

Expression


Co-expression Network