CI01000054_03018229_03030984


Basic Information

Item Value
gene id CI01000054_03018229_03030984
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3018076 ~ 3030984 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_03018229_03030984.mRNA
AATTCCAACGAAAATTAAGAAACGAAAGAATCAGTGGCTGGCTGCTCTGATCATAGATCTCAAAACACCGGTAGAATCAATCAAGAAATGGCGTGTTTGCTCAAAGCATTTTGGACCAGATGACTATTTGGAAAACATGGACAGTGTTACCCGTACCACGGTACGACGTCTAAAGGATACGGCCATCCCAACAATCTTCAGAGTACAGACAGGCCCAAGTGTATCATCACCCATGGCTGTTTCAGAAACTATACAGCATGTGCTTATGAGTCGCAGACAATGTGAAGAACAGAGAAAAATGATGATTGAAGAATTAGGAAAAGTCCTGTTCAGGGAGAGGAATGAAGGAAATACTGGAAGATTTCCTGTACACAATCCTGAGCGATTGAAGCTGTGGTTGCTCGCGCTGCACCTGGATATCAACACACCCGAACATTCGCTGACACTTAAGAGGGTGTGCAGTGATCATTTTTTCGACGATGATTTCCACAACTCTGAGGAAGGAAAGCGTCGTTTTCTGAAAGCGTCGGCTGTGCCCATGACGTGTTTACAGCAAGCAGAGGAAAAAAGGAAGGCAAAGGAGGATATTAATTTGAAAAGAGTGTTCAATAATCGGGTTGTGGAAAAATATGAGTACCTATATCCAGATTTATACGGATGGGATCCTGAGCGAATGAAGCTATGGCTGCTCGCTATTCGCCGGGATGTAAATACACCCTTGGAAAAATTTTATAAGCGCGTGCTGTGCAGTGAACATTTCAGGAGCGAGGATTACAAGGCAGAGAACTTTGGAAGTACAAGACGACTTCTGAAATCGTCAGCTGTGCCTATGCCTGCGTTGTTTCAGCCAAAGGAGGTTTTAGAAACTATAGAGCATGTGCTTATGAGTTGCAGACAATGTGAAGAACAGAGAAAAATATTGATGGGAGAATTAGGAAAAGCTGGACTAACCGGGACAGGAATGAAGAAAATACTGGAAGGTGTGTGCATTTCTCACCGTTCATACCTGAACCGTGAGAAACTAATGAGAGTGCGTAAAAGTGCCTTACCAGCGCCGCGACATGAATGGCTTACCTTTCACACTTTCCCATTAAATGATCCTGAGCGACTGTCACGCTTGACGTAGGCGGAAGTACCGAGTCAGTGTTTACAAATGTGGAGAAGGAGGACCGTTCAAAAGTTGAATGTTCAATAACACATATTCAAATGTCTTTGAGTCGGTTTATTGTTTAAAATGGTCACTTCGTGTGCATATCCTGGATGTTTAAATCTTAAAAAA

Function

NR:

description
uncharacterized protein LOC553317 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_03018229_03030984.mRNA True 1279 mRNA 0.43 7 3018076 3030984

Neighbor

gene id symbol gene type direction distance location
CI01000054_02999099_03015534 NA coding downstream 2542 2998780 ~ 3015534 (-)
CI01000054_02985381_02988122 NA coding downstream 29915 2985360 ~ 2988161 (-)
CI01000054_02868603_02911589 CDK6 coding downstream 106271 2868444 ~ 2911805 (-)
CI01000054_02857402_02860451 NA coding downstream 157625 2857402 ~ 2860573 (-)
CI01000054_02840361_02849268 NA coding downstream 168808 2839832 ~ 2849268 (-)
CI01000054_03032517_03047094 ZMYM4 coding upstream 842 3031826 ~ 3047094 (-)
CI01000054_03049995_03054032 NA coding upstream 18880 3049864 ~ 3054032 (-)
CI01000054_03082593_03087260 SFPQ coding upstream 51364 3082348 ~ 3087545 (-)
CI01000054_03485424_03500327 NA coding upstream 453844 3484828 ~ 3500489 (-)
CI01000054_03918853_03925416 NA coding upstream 887414 3918398 ~ 3925416 (-)
G230922 NA non-coding downstream 38622 2918027 ~ 2979454 (-)
G231001 NA non-coding downstream 100279 2917235 ~ 2917797 (-)
G230913 NA non-coding downstream 151436 2863400 ~ 2866640 (-)
G230999 NA non-coding downstream 322116 2695624 ~ 2695960 (-)
G230997 NA non-coding downstream 323638 2694209 ~ 2694438 (-)
G231003 NA non-coding upstream 25744 3056728 ~ 3056940 (-)
G231004 NA non-coding upstream 59000 3089984 ~ 3090270 (-)
G231010 NA non-coding upstream 85191 3116175 ~ 3116434 (-)
G231016 NA non-coding upstream 108336 3139320 ~ 3139613 (-)
G231096 NA non-coding upstream 181072 3212056 ~ 3258021 (-)
G230923 NA other downstream 180394 2837237 ~ 2837682 (-)
G230178 NA other downstream 1787941 1185533 ~ 1230135 (-)
G230908 NA other upstream 26664 3057648 ~ 3063343 (-)
G231645 NA other upstream 950863 3981847 ~ 3982823 (-)
CI01000054_04671351_04681181 PEF1 other upstream 1639167 4670151 ~ 4681361 (-)
G232274 NA other upstream 2175215 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 3597098 6628082 ~ 6642160 (-)

Expression


Co-expression Network