CI01000054_03032517_03047094 (ZMYM4)


Basic Information

Item Value
gene id CI01000054_03032517_03047094
gene name ZMYM4
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 3031826 ~ 3047094 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000054_03032517_03047094.mRNA
ATGGCACACTGCACGTGTGAGGAACCTTCCCAGATCCTGGACAGTGATGAAGAATTCACCTATTCCTCAGAAGAGGAGCACGAGTCTGATGATGAATGGGAAAATTTTGAAGAGCGAATTGATCCAGCAGAGGATATCAGTTCTGATGACGCTGTCTCAACTCTGTGCTACAACACAAACGCTCAGGCCGCCAGGTCAATTGCGAGGGGTCGCAAATACAAGTGGACTGAAGTCACCGTTAGCGAGATGTACCGCTACTTTGGGCTGATATTCTACATGGGCATGGTGAAGTTGAGCTCAATCAGTGACTACTGGAGGCAGGGCACTCTTTTCTCTGTGCCTTTTCCTGCCACAATTATGTCAAGGGACAGATACCGCACCGTTTCGTGGAATATGCACATGAGTCACCCAGAGGCGGACAAGGAGAATGACAAAAAGAAGGGCACAGATGAGTACGACCGCCTTTTCAGGGTCAAACCCCTCTTGGACACAATCCGTCTCGCATGCAAAACCGTCTATCATCCTAGAAGAAATTTAGCCGTGGATGAAAGAATGGTGGCGTGCAAAGCGCACACAGGAATGACGCAGTACATGAAAGCCAAGCCGACCAAGTGGGGCTTCAAGCTGTTTGTCCTCGCGGACTCATCGAATGGATACACTGTGGACTTTTCTGTGTACACGGGAAAGAATGGCAATGCCTCTGGTCATGGACTACCATATGACACTGTGATGTCTCTTTTGGACACAAAAATATTGGGATCTGGGTACCATGTGTACATGGACAATTTCTACACAAGTCCGAAGCTCTTAAAAGACCTGTTAGCCATGAAGTATGGTGCTTGTGGGACTTACAGAGACTACAGGAAGGACAGCCCACAGAATGCAGCTAATTCACTGACCAAAAAGTCCACCAGGGGATCTATTAGGTGGATTCGGGATGGACCGCTTGTGTTTGTGAAGTGGATGGACACACGAGAGGTGTCTGTCTGTTCCACTATCCATCCTGCCTACAACGGAGACATTGTGCAGAGGAGGGTGAAAGCAGAAGCAACATGGAGCTTGAAGACTTATCCTTGTCCTGCACCTATTATTGCATACAACCAACACATGGGGGGCGTCGACCTGTCCGATCAGCTGTTGCAATACTACACCACACAGCACAAAACCTTGAAGTGGTACAGAAAGATCTTTCTCCACTTATTGGACATTGCTGCCACCAACTCTTATACAATACACAAAGAGCTGTACGGCAACCTGACCCACAAAGAGTTTATGGAGCAGCTTATCGCAGAGCTCTGTGGCGTGTCACTGAAAACCGAACGAAAGCGGACCAGTAGTGACCATGTGCCTGTTCCAGGAGCTCAGCTGAGCTCAGACACCAGGAAAATCGCCTCTGCTGGACGTCGGATCTGTGTGCATTGCAAAGCGACTTACACTCACGAAGTGAACTTCATGGGCTCCATCCATAAGCTGTGCAGCGACAGCTGCTTCAACCAGTTCCGCTCCTCCAATAAGCTAAACATGAACAGCTGTGTGAACTGTGGTGGATACTGCTATGGCACAGACAGTCAGTGTCCATCTCTGCAGATAGAGGGCAGTGTTATGAAGTTCTGCAAACAAAACTGCCTCACAGGCTTCAAAAAGAAGAGTCTGAAACCTGTCCCCTGCAAAATTTGTCGTACCATGCGCCCGGTGGCAGAAATGGTGGATAGTCCAAACACAGGGGGAATTAGAGAGCTTTTCTGCTCCCCTTCCTGTGTTACAGCAAATAAAGTTCAGACTGTCAGTTCTTCAGGTGCTCCAGTAGAATGCAACAGCTGCAAGCTGAAACTAGTGCCTCAGTATCATCTAGCCATGTCTGACGGAACCATCCAGAACTTCTGCTCCTTTTCCTGTGTAGTGTCATATCAGGAGTCCTTCAGTAAGACGAAAACTAACAACCAGGTGAACATGATAACTTCTACAACCAACAACACATCTACCCAAAAACCCGCTGCTCCCAAACTTGCTTCAACAGAGTCTAGCTCATCAACAAAAACTAGCGCTCCCAGTGGTCCGGTGCAAACAGTCACCAAGATCCCCTGCTCTCAGTGTCTGAACTCATTCTACCACAAACCAGAGCTGCTGGAGTTCAAGAGGAAAATGTACGCTTTCTGTGATAACGCTTGTGTGGAGGAGTTCAAACAGATCAACAACGTCATGGCTCGCTGCGAATACTGCAAGATCGATAAAGTTGTAAAGGAGGTGAAAAGGATAAACAAGATTGACCGCTCTTTCTGCAGTGAGGGGTGCAAGTTACTTTATAAGCATGACCTGGTCAAACGCTGGGGGAAGAAACACTGTCGCAACTGCTTCTACTGTAGTGGCTCCTCTCAGACTGTCATCACTGAAGTTTTTGATAAAATAGAGGAGGAGTTCTGTGGGAACGTATGCTTACAGCAACATACCTTATTAATGCGTAAGACGTTATGTCGTGGTTGTGGCTTTCAACTAACAGTGAGTACATTTCTGACAGGAAATAAAGTGCTCCATGTGCAGGCAGGCCAAGAAGATGACCGAGACTGTGAAATGGCTGGTCTGCAGGGAATCACTGGGCCAGTCAAATCTTCAAGCAAACCTCTGACCACACAAGGGACAAGCCCAGCGCCGTCTCCAGCCCCTCAAAGTACAGTGAATCGCACATCACTGATCACTAAAGAGGCCACACCGGTCATTGCCAATGTTATATCACTCTCAAGTGCATCCAATGGACAGCCATGTGTATTGGGAAATAGCGTTCTGCAAGGCTCTGTTCCAGCTGCTACTGCAAAAAGTTCTGGAAATACGGCCAGCACACAGACAGATGGTGTGAAGGCTTCTGCTCCACCACCCCGAATCCTGAAGAATAAGGCCCTACTCTGTAAACCCTTTTGTCAGAACAAAGGCACATCCTGTAAACCCAATGTCTGTGACATGAACACACAAACAGATGGACCTTCTGTGATAGTGCTTCCTGTGCCGGTGCCGGTCTATGTTCCAGTTCCCATGAATCTCTACACACAATACACTCCAAAGTCTGTGGGACTACCGCTACCGGTTCCAGTGCCCTTGTTCTTCCCCACCACTCTCGACAGCGCTGAGCGCATCGTCAAGACCATTCAGGAAATCAAAGAGAAGATCCCTGATGACCCTCTGGAGGCTGACCTCATCATGATGGCGGAGATGGTGGCTGAGGATACAGAGAGGGAGAAATGCATCACATCTACTGATCCGGCTGGAAATATAATGGAGGACCTTGATCTGGAAGCCCTATCCAGCAATCTGAGTTGGGAGGAGGACTCGTTGTCTTCTGCTCAGACATGGGATCAACCCACAGAGCCTGAAAGGCCACCTCCGTCCAGATCTGCCACACAGACCCCCGTCTCTACCGCAGCAGAAGAGCCACAGATGGACCTGGAGGCTGATTTCCCAGTCGAGAGCATTGAACTTTTCAGAGGGCAAGAACAAAAGGAGACGACAGATTCTGGCAAGCGCAAACGCAAGAGAGGACGTGATGGCCTCCCTCAGAAGAAACGGGGCCGTAAGAGTGCAGCAGTGGTTCCAGCCAAACCAGCTCCAGACAACTTCTCGAGCCTCTCCAAACTGCAACATGAGTACGCCGTCAATGCCTGGAAGGACTGGGTGCGCTGGAGGAACGCCCAACCCAACATGGAGACTCCCAAATTTGGCTCACGCATTATGACAATAAAGGAGGACCTGTTGAAGTGTTGCACGGCTGAACTCAGCTACGGCCTCTGCAAGTTCATATCTGAAGTTCGTCGACCCAACGGAGAGAACTACAGCCCTGACAGCATCTTTTACCTCTGCTTGGGCATCCAGAAGTACCTGTTTGAGAACAATCGGATGGAGAACATCTTCTCAGATGTCTTCTACACCAAATTCTGCAATGAAATGACCAGTATACTCAAGGGATGGAAACCAACTATTTTGCCCAGTGGTTATGTTCATTCTCGTGTGGAGGAGGAGTATCTGTGGGACTGTAAGCAGCTGGGAGCGTTTTCACCCGGTGTGCTGCTCAACACGTTGCTGTATTTCTTCACCAAGTTCTTCAACTACAAGACTGTGGAGCAGCACCGTTGCCTCTCTTTTGGCCACATCGTCCGCTGCTCTCGGAGCAAGGGCAGCACCAAAATGGCCTGTTTGCGTTTCTATCCCCCCAAAGAGGACTCAAGCTCTGATGGCATCCCTGCAAAGAAAAGAAAGGAAGAGGATGACGACAATGACACTATATATGAGATAAAGGAAAATGCAGACAATCCTCTCCGCTGTCCTGTCAGGCTGTACGAGTTCTATATCTCAAAATGCTCACCCAGTGTGAGGCAATGCACGACCCAATTCTACCTGAGCCCCGAGCGCTCCTGCGTACCCAGCAGTCCCATGTGGTTCTCAACCGCCTCGCTGAGCAATGAGGCTCTGGACAGCATGCTCACTCGCATCCTTACTGTCAGAGAGCTGCACCTGGAGACGGACAAAACACCCAACGAGACCGATTCAGACAGCGACTCTGACTTCAGACCGTGACGTTAAACTGAGTCTCGCACCATAAGCGCACATCAAAATTGCAGAGTCAAGGAGGCGTCTGGGGGAAACATTTCTCCTAGATGGCTCTGTGTAATTCTACAAGGCTGACAAAACCTGGATGCCGTTAAATGGGCCTTAAAGATGTTAGTGATTCCGACTTGGAAAGCAACTGTTTTGTCATTGTATTTTCCATGTTTAATTGGATAGTAGTTATGAGGCTGTACAGTCTTTTTTTCCTGATTAAGTGTATGAAAAACTAGATTTGAAAAAGCAGCTGATGTCAGTGAAACCATTTTGAAAGGTGCATATGGTTGTATGGATTTCGGTTAGAGGACAATGCTGAATTTTATGCAGTGCCACATTATACACAAGTGATCTTTAATGGGATTACTGCACATTCTCTGTATTATGAAACACTAAAGACATGAACAGCATCTTTGTACAACAGGCATTAAAAACAGTGGCTGGCGTATCTACCCTTTGTTCATTTGGAGTAAACATGAATTTTAAGGGTTTTTTTTTTTTTTGCAACCTTACCATTCCAGGGTTTATTAATTCCTGTACTATGGACAATACTGTATTTCTTTGCATAAAAAAGACAATGAAACTGAATCTGTGAGTCTTTCATTTTGTGTTTCAACATATACTGGCTTTTAAGTTGTCTCTTCATGAAGTTGACATTTCAAATAAA

Function

symbol description
zmym4 Predicted to enable DNA binding activity. Involved in cytoskeleton organization and regulation of cell morphogenesis.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000054_03032517_03047094.mRNA True 5251 mRNA 0.48 23 3031826 3047094

Neighbor

gene id symbol gene type direction distance location
CI01000054_03018229_03030984 NA coding downstream 842 3018076 ~ 3030984 (-)
CI01000054_02999099_03015534 NA coding downstream 16292 2998780 ~ 3015534 (-)
CI01000054_02985381_02988122 NA coding downstream 43665 2985360 ~ 2988161 (-)
CI01000054_02868603_02911589 CDK6 coding downstream 120021 2868444 ~ 2911805 (-)
CI01000054_02857402_02860451 NA coding downstream 171375 2857402 ~ 2860573 (-)
CI01000054_03049995_03054032 NA coding upstream 2770 3049864 ~ 3054032 (-)
CI01000054_03082593_03087260 SFPQ coding upstream 35254 3082348 ~ 3087545 (-)
CI01000054_03485424_03500327 NA coding upstream 437734 3484828 ~ 3500489 (-)
CI01000054_03918853_03925416 NA coding upstream 871304 3918398 ~ 3925416 (-)
CI01000054_03964701_03964965 NA coding upstream 917596 3964690 ~ 3964965 (-)
G230922 NA non-coding downstream 52372 2918027 ~ 2979454 (-)
G231001 NA non-coding downstream 114029 2917235 ~ 2917797 (-)
G230913 NA non-coding downstream 165186 2863400 ~ 2866640 (-)
G230999 NA non-coding downstream 335866 2695624 ~ 2695960 (-)
G230997 NA non-coding downstream 337388 2694209 ~ 2694438 (-)
G231003 NA non-coding upstream 9634 3056728 ~ 3056940 (-)
G231004 NA non-coding upstream 42890 3089984 ~ 3090270 (-)
G231010 NA non-coding upstream 69081 3116175 ~ 3116434 (-)
G231016 NA non-coding upstream 92226 3139320 ~ 3139613 (-)
G231096 NA non-coding upstream 164962 3212056 ~ 3258021 (-)
G230923 NA other downstream 194144 2837237 ~ 2837682 (-)
G230178 NA other downstream 1801691 1185533 ~ 1230135 (-)
G230908 NA other upstream 10554 3057648 ~ 3063343 (-)
G231645 NA other upstream 934753 3981847 ~ 3982823 (-)
CI01000054_04671351_04681181 PEF1 other upstream 1623057 4670151 ~ 4681361 (-)
G232274 NA other upstream 2159105 5206199 ~ 5209240 (-)
CI01000054_06629482_06641861 TRIQK other upstream 3580988 6628082 ~ 6642160 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014225 zmym4 coding NC_007130.7 CM002903.2 40069524 ~ 40113935 (+)