G234097


Basic Information

Item Value
gene id G234097
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000054
NCBI id null
chromosome length 13006764
location 7706096 ~ 7707359 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU265597
CTCAGAGCGGCACATGCAGCTCTTGGTGTGTGTAACCCTACTTCTGATAAGGCTTGTGTGTAACAATCAACAGCCTTTGACCTGAAGGGCTTGTGTGAGGCAGCAGAGGAGAGGAAAGCTGTTGCGGCCTTCATCACATCAGGGTCATCAGAGGTCAGCAGCCTTGCCATGGCCCACAGGGTTTGAGGGCGGGGCTGAAGACACATGACGGACACTTCCTGTAGTTCCTTCAGAGAACGTTCTGTGTCCCCACAGCTCAGGGCTTCTTCAAGCATGACCTCTTTGGCTAAATCCAGCAGGTGTCGCTCCATGTCCATGACATCGTGTTCAACAGAGTAGTGGTGAAACTGAAACACGGTGAGGACATCCTGTGCCAGGGAAGACGGCGACGGACATGAAGATGAGGCCAGATCGCTCCTGTCCACCATTTCATTCACCACCATCCTGATCACTGAGTCAGGAGAGTGAGGTAGAATCTGTTGCAGTGGCAAGGCAAAGCTGAGATGCATGTGCTTTAACACTCGGTCCAGTGTAGTATGGAACAGACCACCACTGCAGTCGGACCACAGAGACATTAGTGTCGGCCGCTCCACCAGCCCAGGCAGCACTGTTTAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265597 True 617 lncRNA 0.53 4 7706096 7707359

Neighbor

gene id symbol gene type direction distance location
CI01000054_07642350_07658894 NA coding downstream 45581 7641800 ~ 7660515 (-)
CI01000054_07607425_07611037 STMN2A, STMN2B, STMN2 coding downstream 95059 7606500 ~ 7611037 (-)
CI01000054_07516390_07526784 TPD52 coding downstream 178647 7516167 ~ 7527449 (-)
CI01000054_07418471_07418846 NA coding downstream 287243 7418167 ~ 7418853 (-)
CI01000054_07398765_07399272 NA coding downstream 306042 7398554 ~ 7400054 (-)
CI01000054_07712126_07718933 GMNN coding upstream 4676 7712035 ~ 7718933 (-)
CI01000054_07723457_07725732 ACOT13 coding upstream 16049 7723408 ~ 7725732 (-)
CI01000054_07737375_07747797 TMEM64 coding upstream 29895 7737254 ~ 7747797 (-)
CI01000054_07793409_07805739 TMEM55A coding upstream 85840 7793199 ~ 7805739 (-)
CI01000054_07874540_07894985 NA coding upstream 166885 7874244 ~ 7895322 (-)
G234071 NA non-coding downstream 1930 7700875 ~ 7704166 (-)
G234057 NA non-coding downstream 68121 7637502 ~ 7637975 (-)
G234039 NA non-coding downstream 71345 7633002 ~ 7634751 (-)
G234042 NA non-coding downstream 75268 7629577 ~ 7630828 (-)
G234025 NA non-coding downstream 138587 7567234 ~ 7567509 (-)
G234066 NA non-coding upstream 27296 7734655 ~ 7736512 (-)
G234101 NA non-coding upstream 43846 7751205 ~ 7751415 (-)
G234120 NA non-coding upstream 108872 7816231 ~ 7818263 (-)
G234126 NA non-coding upstream 121527 7828886 ~ 7829138 (-)
G234128 NA non-coding upstream 123754 7831113 ~ 7831355 (-)
CI01000054_07165957_07169539 HEYL other downstream 534423 7165435 ~ 7169539 (-)
CI01000054_06629482_06641861 TRIQK other downstream 1052083 6628082 ~ 6642160 (-)
G232274 NA other downstream 2496856 5206199 ~ 5209240 (-)
CI01000054_04671351_04681181 PEF1 other downstream 3033863 4670151 ~ 4681361 (-)
G231645 NA other downstream 3723273 3981847 ~ 3982823 (-)
G235216 NA other upstream 1540680 9248039 ~ 9248538 (-)
CI01000054_09483912_09484282 MRPL36 other upstream 1775788 9483147 ~ 9484282 (-)
CI01000054_09864693_09866871 PPP1R11 other upstream 2155962 9863321 ~ 9867212 (-)
CI01000054_10817235_10819181 TAC1 other upstream 3096512 10816015 ~ 10819362 (-)
CI01000054_10872970_10881017 SDHAF3 other upstream 3163745 10871104 ~ 10881495 (-)

Expression


Co-expression Network