XLOC_009938 (dre-mir-30b)


Basic Information

Item Value
gene id XLOC_009938
gene name dre-mir-30b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 25341724 ~ 25341811 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019806
TTCCAGTGTAGTCGCTGTAAACATCCTACACTCAGCTGTGAGCTGCAGACGAGGCTGGGCGGAGGGTGTTTGCTGTGACTGTCTGGAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083528

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019806 True 88 miRNA 0.56 1 25341724 25341811

Neighbor

gene id symbol gene type direction distance location
XLOC_009937 dre-mir-30d coding upstream 181 25341416 ~ 25341543 (+)
XLOC_009936 dync1i1 coding upstream 3890 25316973 ~ 25337834 (+)
XLOC_009935 tbc1d31 coding upstream 26588 25296389 ~ 25315136 (+)
XLOC_009934 si:dkey-29h14.10 coding upstream 46539 25285998 ~ 25295185 (+)
XLOC_009933 fbxo32 coding upstream 69091 25259313 ~ 25272633 (+)
XLOC_009939 zfat coding downstream 341 25342152 ~ 25360788 (+)
XLOC_009940 jarid2a coding downstream 65210 25407021 ~ 25500729 (+)
XLOC_009941 mylipb coding downstream 194182 25535993 ~ 25548738 (+)
XLOC_009942 NA coding downstream 202615 25544426 ~ 25550654 (+)
XLOC_009943 NA coding downstream 210511 25552322 ~ 25579827 (+)
XLOC_009930 NA non-coding upstream 99414 25219435 ~ 25242310 (+)
XLOC_009931 NA non-coding upstream 106631 25233953 ~ 25235093 (+)
XLOC_009929 NA non-coding upstream 127746 25207618 ~ 25213978 (+)
XLOC_009913 BX539313.2 non-coding upstream 422767 24905556 ~ 24918957 (+)
XLOC_009948 NA non-coding downstream 488893 25830704 ~ 25831076 (+)
XLOC_009949 NA non-coding downstream 617085 25958896 ~ 25960158 (+)
XLOC_009954 NA non-coding downstream 732900 26074711 ~ 26080716 (+)

Expression


Co-expression Network