CI01000091_00791956_00794999


Basic Information

Item Value
gene id CI01000091_00791956_00794999
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 791560 ~ 795003 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000091_00791956_00794999.mRNA
CTATAAATGCACTGAACACACATGACCCACAGAGAGTATCAGTGAGTGGCAGGAGGGAGGTCCAGAACCATGGAAGGGGAACAGATCCCCACTCAACAGCAATTGACAACCATGGGGGAGCCGACAGAGGAGAAGACCATGGTGGAGCCAACGGAGGAAGAAACCATGTAGAAGCCAGCGGTGGAGGAGCCGACGGTGAAACTAGTGAAGTGGATGATCATGGCGGAGCTGGAGGGATGGAGATCCACGGAAGAACCCAAGAAACTGCCGAAGCCAGGGAATTAGAATACCGAGGTGGAGCCGAAGGAAATGGAGACTAAGGCAAAGCTGGAAGAACGAAGACTGAGGTGGAGCCGGTGGGACTGAGGACTACAGAGGAGTCTGTGGAAAGAGACCATGGTGGTGCCAGCGGTGGAGAAGTCAATAGCGGAACTGGCAGGTGCTGCAGCCTGGAGAGAGATGGCTGAGCAGGAGGATGAGAAGCAAAGAAATTGGATGAAACCAGCAAAGGACGCAGAGTCAGGGACCTGGACAGTGAGGGAGGGAGGCAGAGTCAGGGAACTGGACCAAGAAATCAGTCTGTTCAACCACAACCTCTCTGCCTCCTCTTTATCCATGAACAGCTGCAAGAGAGTAAGAGAGCCAGTTCAGTTCAATTCATTTAGACTATTATATTCCAATGAACTTCCAAAGAACTTTACAACTCTGTCCATCATACAGTATCACTACAAGGACAGCCAAAACGCTATTGTGCCAAATTCTGAGTCATCTGCTAAGAGATGAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000091_00791956_00794999.mRNA False 787 mRNA 0.51 2 791560 795003

Neighbor

gene id symbol gene type direction distance location
CI01000091_00784583_00790474 NA coding upstream 1076 784263 ~ 790484 (+)
CI01000091_00607895_00625729 SBDS, SBDS.S coding upstream 165616 607590 ~ 625944 (+)
CI01000091_00457499_00460775 NA coding upstream 328907 457499 ~ 462653 (+)
CI01000091_00438822_00455209 CUL3, CUL3B, CUL3.L coding upstream 336207 438822 ~ 455353 (+)
CI01000091_00390010_00390965 NA coding upstream 400498 389933 ~ 391062 (+)
CI01000091_00844497_00846211 NA coding downstream 49434 844437 ~ 846372 (+)
CI01000091_00893581_00897135 NA coding downstream 98116 893119 ~ 897140 (+)
CI01000091_00958756_00963695 SHOX2 coding downstream 163638 958641 ~ 964043 (+)
CI01000091_01066118_01104145 NA coding downstream 270501 1065504 ~ 1104308 (+)
CI01000091_01168029_01169885 NA coding downstream 373026 1168029 ~ 1170370 (+)
G302756 NA non-coding upstream 40944 750159 ~ 750616 (+)
G302702 NA non-coding upstream 150595 640735 ~ 640965 (+)
G302701 NA non-coding upstream 150911 640341 ~ 640649 (+)
G302697 NA non-coding upstream 153803 637326 ~ 637757 (+)
G302696 NA non-coding upstream 154816 636524 ~ 636744 (+)
G302858 NA non-coding downstream 141841 936844 ~ 937880 (+)
G302900 NA non-coding downstream 211335 1006338 ~ 1006971 (+)
G303118 NA non-coding downstream 212972 1007975 ~ 1008351 (+)
G303136 NA non-coding downstream 262134 1057137 ~ 1057382 (+)
G303147 NA non-coding downstream 280116 1075119 ~ 1075426 (+)
G302679 NA other upstream 202034 586912 ~ 589526 (+)
G302512 NA other upstream 729393 59635 ~ 62167 (+)
G302768 NA other downstream 160907 955910 ~ 957032 (+)
G303132 NA other downstream 257620 1052623 ~ 1053014 (+)
CI01000091_00382012_00384325 CLDNJ coding upstream 383479 381775 ~ 384589 (+)

Expression


Co-expression Network