G302900


Basic Information

Item Value
gene id G302900
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 1006338 ~ 1006971 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU344060
CCAATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATGATGTGGAAGTTTCAAATTTCAATATTTTATTCAGAATACAACATAGATGACATATCAAATGTTTAAACTGAGAAAATGTATAATTTTAAGGGAAAAATAAGTTGATTTTAAATTTCATGGCATCAACACATCTCAAAAAAGTTGGGACAAGGCCATGTTTACCACTGTGTGGCATCCCCTCTTCTTTTTATAACAGTCTGCAAATGTCTGGGGGCTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGTCTAATACAGGCTTCTAGTTGCTCAACTGTCTTAGGTCTTCTTTGTCGCATCTTCCTCTTTATGATGCGCCAAATGTTTTCTATGGGTGAAAGATCTGGACTGCAGGCTGGCCATTTCAGTACCCGGATCCTTCTTCTACGCAGCCATGATGTTGTAATTGATGCAGTATGTGGTCTGGCATTGTCATGTTGGAAAATGCAAGGTCTTCCCTGAAAGAGACGACGTCTGGATGGGAGCATATGTTGTTCTAGAACTTGGATATACCTTTCAGCATTGATGGTGCCTTTCCAGATGTTTAAGCTGCCCATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU344060 True 634 lncRNA 0.39 1 1006338 1006971

Neighbor

gene id symbol gene type direction distance location
CI01000091_00958756_00963695 SHOX2 coding upstream 42295 958641 ~ 964043 (+)
CI01000091_00893581_00897135 NA coding upstream 109198 893119 ~ 897140 (+)
CI01000091_00844497_00846211 NA coding upstream 159966 844437 ~ 846372 (+)
CI01000091_00791956_00794999 NA coding upstream 211335 791560 ~ 795003 (+)
CI01000091_00784583_00790474 NA coding upstream 215854 784263 ~ 790484 (+)
CI01000091_01066118_01104145 NA coding downstream 58533 1065504 ~ 1104308 (+)
CI01000091_01168029_01169885 NA coding downstream 161058 1168029 ~ 1170370 (+)
CI01000091_01194555_01249090 HEPHL1A coding downstream 187584 1194555 ~ 1249340 (+)
CI01000091_01249406_01250775 NA coding downstream 242385 1249356 ~ 1251361 (+)
CI01000091_01265220_01283983 HEPHL1A coding downstream 257973 1264944 ~ 1284290 (+)
G302858 NA non-coding upstream 68458 936844 ~ 937880 (+)
G302756 NA non-coding upstream 255722 750159 ~ 750616 (+)
G302702 NA non-coding upstream 365373 640735 ~ 640965 (+)
G302701 NA non-coding upstream 365689 640341 ~ 640649 (+)
G303118 NA non-coding downstream 1004 1007975 ~ 1008351 (+)
G303136 NA non-coding downstream 50166 1057137 ~ 1057382 (+)
G303147 NA non-coding downstream 68148 1075119 ~ 1075426 (+)
G303159 NA non-coding downstream 79698 1086669 ~ 1088891 (+)
G303161 NA non-coding downstream 84667 1091638 ~ 1093760 (+)
G302768 NA other upstream 49306 955910 ~ 957032 (+)
G302679 NA other upstream 416812 586912 ~ 589526 (+)
G302512 NA other upstream 944171 59635 ~ 62167 (+)
G303132 NA other downstream 45652 1052623 ~ 1053014 (+)

Expression


Co-expression Network