G303159


Basic Information

Item Value
gene id G303159
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000091
NCBI id null
chromosome length 1322612
location 1086669 ~ 1088891 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU344366
GCAGCTCTACTATTTACTACATAATATGTGTAATACAAGTCATACAAGTGTGTTCACTGAATACACTTACAAATGTATTTAATCATGTCTGAGATTTTTTTATTGGAAGGATAATGATTATATTTTAAGGATATTGAGAGTTTTTGAAGCTCATAAATTGACTAGAGTTATAGAGGAAGTAGTTAGTAAAGCGTCATTCATTCTCTGGTCTATGCAGTCTATATTTGGCAGTCATATGATTCATATTCTTTTGAAATTCATCTTAAAGACTGAAAAGATGCAGGCAGTGTTCCATTGTTGTCTGGTTGGTATAGACTGTAGTTTGCAGTTGTTGATCAATAATACAGTTTATGAAATAGGATTGGGATATGAGGACCCAGAGCTGGAGTTCATACCAATTCTAGCTAGACCATTTAAGTAAATAACAATATTTTATAACTGATGCCAAATCTACCGTAGGTAGCATATGTAGCAAAGAACAGACAGAACTGATAGGTTTAGATTTTTTTTTTTCTGGTCTGGTAAGAAATTAAACTTTTTGCATTTTGAACTGAATTGTTCTAAGTGACCAGATAGTGAAACACATTGCCATGCACACACATGCATATGATACTGTGATCACTGACTGGAAGCAGGAAAGTGTTCTTTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTCCAGTGCAGAAACACCAAATGCCAGGTAAGTGATGTTCATATATATCTTTGAACAGGATTTATTTCCAGGTATAACTGTGTACTCAAAATGTGTCTTTGACTCTCATTTATATACAGTATCTCACAAAAGTGAGTACACTCCTCACATTTCAGCAACCATTTTATTATATGTTCTCAAGGGACAATACTATAGAAATGAAAATTGGATATACTTTAGAGTAGACAATGTGCAGCTTGTATAGCAGTACAGATTTACTGTTCTCTGAAAATAACTCAACATACAGCCATTATTGTCTAAATAACTGGCAACAAAAGTGAGTACAACCTAAGTGAACAAAACTGTGTCCAAAGTGTCAATATTTTGTGTGAGCACCATTGTTATTTAGCACTGCCTTAATCCTCCTGGGCATGGAATTCACCAGAGCTGCACAGGTTGTTGCTGGGATCCTCTTCCACTCCTCCATAATGACATCACGGAGCTGCTGGATGTTAGACACATGGTGCTTCTCCACCTTCCGCTTGAGGATGCCCCACAGGTGCTCAATAGGGTTCAGGTCTGGAGACATACTTGGCCACTCAATCACCTTCACCTTCAGCTTCCTCAGCAAGGCAGTTGTCATCTTGGCGGTGTTTGGGGTCATTATCATGCCATTCAGCCCAGTTTCTGAAGGGAGGACATCATGTTCTGCTTCAGAATGTCACAGTACATGTTGGAATCCATGTTTCCCTCAATGAAGCAGAGCTCCCCAGTACCAGCAGCAATCATGCAGCCCCAGACCATGATGCTACCACCACCATACTTGACTGTAGGCAAGACACAATTTTCTTGGTACTCCTCACCAGGGCGTCGCCACACATGCTGGACACCATCTGAGCCAAACAAGTTTATCTTAGTCTCATCAGACCACAGGACATGGTTCCAGTAATTCATGCTCTTGGACAGGTTGTCTTCAGCAAACTGTTTGCGGGCTTTCTTGTGAGACAGCTTCAGAAGAGGCTTCCTTCTGGGACGACGGCCATGCAAACTGACTTGTTGCAGTGTGCGGCGTATGGTCTGAGCACTGACAAGCTGACCTTCTGCTTCTGCAACCTCTAAAGCAATGCTGGCAGCACTCATGCATCTGTTTTTTGAAGCCAGCTTCTGCACCTGACGCACAGCACAAGGTCTCAACTTCTTTGATTCAACTTCTTTGGCCTGTTCCGAGTGGAACCCATCTTGGAAAACCTCTCTCTATGACCCTGGCCACTGTGCTGTAACTCAGTTTCATGGTGTTACCGATCTTCTTATAGCCTAGGCCATCTTTGTGGAGAGCAACAATTCTAATTCTCAAATCCTCAGGGAGTTCTTTGCCATGAGATCACATCCAGTGATCAGTATGAGAGAATTGTACTCAAAGCACCAAATTTTAACTGCTCTAATACAAGATCCACACATTTGTATGGTCCTATCAAGCAGACAAAAAACATGAACATGATGAATAGGACATATGGCTTTGCATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU344366 True 2193 lncRNA 0.41 2 1086669 1088891

Neighbor

gene id symbol gene type direction distance location
CI01000091_00958756_00963695 SHOX2 coding upstream 122626 958641 ~ 964043 (+)
CI01000091_00893581_00897135 NA coding upstream 189529 893119 ~ 897140 (+)
CI01000091_00844497_00846211 NA coding upstream 240297 844437 ~ 846372 (+)
CI01000091_00791956_00794999 NA coding upstream 291666 791560 ~ 795003 (+)
CI01000091_00784583_00790474 NA coding upstream 296185 784263 ~ 790484 (+)
CI01000091_01168029_01169885 NA coding downstream 79138 1168029 ~ 1170370 (+)
CI01000091_01194555_01249090 HEPHL1A coding downstream 105664 1194555 ~ 1249340 (+)
CI01000091_01249406_01250775 NA coding downstream 160465 1249356 ~ 1251361 (+)
CI01000091_01265220_01283983 HEPHL1A coding downstream 176053 1264944 ~ 1284290 (+)
CI01000091_01306611_01309678 NA coding downstream 217579 1306470 ~ 1309678 (+)
G303147 NA non-coding upstream 11243 1075119 ~ 1075426 (+)
G303136 NA non-coding upstream 29287 1057137 ~ 1057382 (+)
G303118 NA non-coding upstream 78318 1007975 ~ 1008351 (+)
G302900 NA non-coding upstream 79698 1006338 ~ 1006971 (+)
G302858 NA non-coding upstream 148789 936844 ~ 937880 (+)
G303161 NA non-coding downstream 2747 1091638 ~ 1093760 (+)
G303179 NA non-coding downstream 23484 1112375 ~ 1112673 (+)
G303187 NA non-coding downstream 29318 1118209 ~ 1118562 (+)
G303238 NA non-coding downstream 202425 1291316 ~ 1293265 (+)
G303245 NA non-coding downstream 214360 1303251 ~ 1303482 (+)
G303132 NA other upstream 33655 1052623 ~ 1053014 (+)
G302768 NA other upstream 129637 955910 ~ 957032 (+)
G302679 NA other upstream 497143 586912 ~ 589526 (+)
G302512 NA other upstream 1024502 59635 ~ 62167 (+)

Expression


Co-expression Network