CI01000299_05379545_05381902


Basic Information

Item Value
gene id CI01000299_05379545_05381902
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 5379149 ~ 5382140 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_05379545_05381902.mRNA
ATTGGGCGGAATCAGCTCAGAGTTACAGCAGCAGTGAAAGTGTGTTAGTGGAATTACTTTCGCTTTCGAGCGCGTTGTTTGCTCGAGTAAAAGCGTGAATGTGTCATTCAGTGAAAGTGTGCTGGTGTACAAACATCCATAATGCAAACACCAGCTCAAGTGGGTATCTAAACATTTAGAGTTATTGGGAAGACGTGATCCTCTTGAAATGAGAAGTGACTAAATGAAGAGCTCCGGGATGAATTTTGCCTCCGGAAAACGATCTGTTCACTTCAGGGGATTTTCAGCTGCGTTTATGCTGTTATCTATATGCGCGCGCGGTGATGGTGCTGACCATAACGTTACGGCCATGGCTGGAAAAGCAGCAGCTCTGCCCTGCAAGTGTCCGCCTGATTACCCTCCGTATGTGCTCTGGCAGAAGGCCGTTGGTGCACAGAGGCTCGTGGTAAATTTCTACGAAGACGACAATGAAACGGCACCAGAGTTTCGCAACAGAACCGTGCTGGAGCTGAAGACAGGAAACTGTTCTCTTGTGTTCTACAGCGTGCTTCTGTCAGACCAGGGACTGTACGAGTGCTACTATCAGAAAAGACCTTTAAGACACAACAAAATCTATCTGGAGGTCACAGAAATCAAGAGCCGTACTTTCACAGTTGACTTCAACAATGTTCGTTTTATCTCTGTTCATCCGTCTGTTCCTTGGGAACTGAAGATATGGCTTTGCTGTTAACCATCATTTTTTATCTCACCGCTACCAAATCGAGTTTGTTTGCCATCAAACGAATGGTTTCTGTGGAGATGTAACGGCCATGTGACTTTCTGAGCTTTCAGTACAGTGTGCTCAAGACCAGAACACAACATACAAGTTTTTAAATCAACACCTTTGCATTATTCCAACACAAATATGCAATGAACTTCTGATGTTTCTGTAGATAACCAAAGACGAGATTCAGTTCTGAGCATCCAGAAAACTGTGGTGTCGTGTTCGGTTTGCGGGATCCTTGTCATTGTGATTGCAGCGGCTGCATTATTTGTGGGAATTATTCACAAAAAAAAACATCAAAGGAATGGTAAAGTCCATTTTTTTTCTCTAAGACTTAAATGTGTTTATCACAATTGAAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_05379545_05381902.mRNA True 1126 mRNA 0.43 3 5379149 5382140

Neighbor

gene id symbol gene type direction distance location
CI01000299_04913779_04927715 NA coding downstream 451434 4913373 ~ 4927715 (-)
CI01000299_04861862_04862244 NA coding downstream 516556 4861577 ~ 4862593 (-)
CI01000299_04741460_04746667 NA coding downstream 632482 4741447 ~ 4746667 (-)
CI01000299_04708767_04714088 RCAN1B coding downstream 665061 4708503 ~ 4714088 (-)
CI01000299_04658984_04668843 ATP1A1A.4, ATP1A1 coding downstream 710127 4658895 ~ 4669022 (-)
CI01000299_05419449_05423414 ATP5J coding upstream 37263 5419403 ~ 5423414 (-)
CI01000299_05428160_05443433 APP, APPA coding upstream 45521 5427661 ~ 5443433 (-)
CI01000299_05457285_05462908 NA coding upstream 74967 5456864 ~ 5463491 (-)
CI01000299_05466693_05471714 ADAMTS1 coding upstream 83502 5465642 ~ 5471987 (-)
CI01000299_05478688_05502027 ADAMTS5 coding upstream 95342 5477482 ~ 5503268 (-)
G407591 NA non-coding downstream 196787 5085394 ~ 5182362 (-)
G407565 NA non-coding downstream 382240 4957987 ~ 4996909 (-)
G407564 NA non-coding downstream 422784 4956098 ~ 4956365 (-)
G407562 NA non-coding downstream 439210 4939691 ~ 4939939 (-)
G407526 NA non-coding downstream 555598 4822041 ~ 4823551 (-)
G407669 NA non-coding upstream 31194 5413334 ~ 5418371 (-)
G407734 NA non-coding upstream 170488 5552628 ~ 5554845 (-)
G407764 NA non-coding upstream 252700 5634840 ~ 5639866 (-)
G407848 NA non-coding upstream 392109 5774249 ~ 5775541 (-)
G407413 NA other downstream 828428 4475994 ~ 4550721 (-)
G405053 NA other downstream 3361099 2017687 ~ 2018050 (-)
G404976 NA other downstream 3498161 1855639 ~ 1880988 (-)
G407805 NA other upstream 445696 5835889 ~ 5835989 (-)
CI01000299_06526127_06532048 CEP97 other upstream 1149861 6526127 ~ 6532048 (-)

Expression


Co-expression Network