G1957


Basic Information

Item Value
gene id G1957
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 2535583 ~ 2535795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2562
ccctaaccctaaccctaaccctaaaccctaaccctaacccctaacccctaaccctaaccctaaccctaaccctaacccctaaccctaaccctaaccctaacccaagggCTCAATGAGCCCCAGATGTGGGCCAATATGGGACTAATTGGACTGGGAAGGAACATTTGACCATGAAGCTCACCTCGTTGTCTCTTTATTCGTGAAGGTTTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2562 True 213 lncRNA 0.30 1 2535583 2535795

Neighbor

gene id symbol gene type direction distance location
zbtb11 LOC106560622 coding upstream 277258 2212135 ~ 2258325 (+)
dpt LOC106574207 coding upstream 342688 2176672 ~ 2192895 (+)
nme7 at233 coding upstream 436899 1984326 ~ 2101039 (+)
tmem131 LOC102783117 coding upstream 568007 1859377 ~ 1967576 (+)
LOC110520782 LOC106574119 coding upstream 765149 1732789 ~ 1770434 (+)
LOC110531937 LOC106574099 coding downstream 2539 2538334 ~ 2580308 (+)
LOC118966170 NA coding downstream 863631 3399426 ~ 3400148 (+)
bcl6aa LOC106574104 coding downstream 1066868 3602663 ~ 3624582 (+)
LOC118965227 NA coding downstream 1287341 3822517 ~ 3826226 (+)
trnap-cgg NA coding downstream 1311828 3847623 ~ 3847694 (+)
G1936 NA non-coding upstream 1916 2456072 ~ 2533667 (+)
G1942 NA non-coding upstream 3266 2531549 ~ 2532317 (+)
G1934 NA non-coding upstream 83520 2451849 ~ 2452063 (+)
G1929 NA non-coding upstream 99476 2435855 ~ 2436107 (+)
G1115 NA non-coding upstream 139322 2392794 ~ 2396261 (+)
G1958 NA non-coding downstream 350 2536145 ~ 2536461 (+)
G1959 NA non-coding downstream 952 2536747 ~ 2537044 (+)
G1961 NA non-coding downstream 1730 2537525 ~ 2537754 (+)
G2004 LOC106574222 non-coding downstream 80774 2616569 ~ 2618562 (+)
G2018 NA non-coding downstream 112232 2648027 ~ 2656615 (+)
G998 LOC106576565 other upstream 272018 2258883 ~ 2305334 (+)
G961 NA other upstream 455980 2078898 ~ 2079603 (+)
G583 NA other upstream 1525376 1003783 ~ 1010207 (+)
G166 NA other upstream 2215609 318047 ~ 319974 (+)
G51 NA other upstream 2405320 120466 ~ 130263 (+)
G2016 NA other downstream 108540 2644335 ~ 2645169 (+)
G2343 NA other downstream 678902 3214697 ~ 3216234 (+)
G2464 NA other downstream 967474 3503269 ~ 3503581 (+)
G3176 NA other downstream 1639528 4175323 ~ 4178073 (+)
G3234 NA other downstream 1863109 4398904 ~ 4399444 (+)

Expression


Co-expression Network