XLOC_030972



Basic Information


Item Value
gene id XLOC_030972
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 20600387 ~ 20614620 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061979
TCTTTAGTTTATATTCCAAAGCTGCAAAAGAACACATACAGTAATAAAGAATAGATTAAAGAGTGCTAGTGTTTAAAAGTTAGTTAatgtgtttgattgtttgtttttagaagaGAATAAGTAGACATGTCGTTTCAGACAACATTGGAAACTCCTCAGAATTGATGATTGATGTTGCTTTGAAATTGATTAGGTCTCCTCATTAAGGGCACTCTCAATCTTGGACAGAAAGGAATAGCATTTCTTCTTAAAGTCTTTGGCCATGAATGCATAAAGTAAAGGGTTTAGAAAGCTGTTCACACTGGCAAGAGTAACAGATACTTGTTGGGCTCTGTACATGGCAGTACTGTGCTTAGTTTGGCTCAACTCTACAATAGAAACTATCTGAAAAGGTAACCAGCAGAGGAAAAAAGCTGTGATCAGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061979 True 424 lncRNA 0.36 2 20600387 20614620

Neighbor


gene id symbol gene type direction distance location
XLOC_030971 ficd coding downstream 109115 20485624 ~ 20491272 (-)
XLOC_030970 ISCU coding downstream 154305 20443888 ~ 20446082 (-)
XLOC_030969 NA coding downstream 180016 20416722 ~ 20420371 (-)
XLOC_030968 AL845326.1 coding downstream 191435 20408836 ~ 20408952 (-)
XLOC_030967 NA coding downstream 302948 20289359 ~ 20297439 (-)
XLOC_030973 NA coding upstream 1451 20616071 ~ 20619339 (-)
XLOC_030974 wscd2 coding upstream 12580 20627200 ~ 20678300 (-)
XLOC_030975 si:ch211-225b11.1 coding upstream 172152 20786772 ~ 20814588 (-)
XLOC_030976 pik3ip1 coding upstream 251952 20866572 ~ 20879527 (-)
XLOC_030977 si:ch211-225b11.4 coding upstream 271662 20886282 ~ 20921677 (-)
XLOC_030961 NA non-coding downstream 491122 20105008 ~ 20109265 (-)
XLOC_030959 NA non-coding downstream 636831 19960680 ~ 19963556 (-)
XLOC_030981 NA non-coding upstream 624713 21239333 ~ 21242084 (-)
XLOC_030982 BX470224.4 non-coding upstream 678510 21293130 ~ 21293245 (-)
XLOC_030984 NA non-coding upstream 994738 21609358 ~ 21852227 (-)
XLOC_030985 CR848717.1 non-coding upstream 1121739 21736359 ~ 21737345 (-)

Expression



Co-expression Network