XLOC_036530 (dre-mir-27b)


Basic Information

Item Value
gene id XLOC_036530
gene name dre-mir-27b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 30167435 ~ 30167525 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00071361
TCTTTTCTAGCAGGTGCAGAGCTTAGCTGATTGGTGAACAGTGATTGAACTCTTTGTTCACAGTGGCTAAGTTCTGCATCTGAGGAGAGGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000080833

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00071361 True 91 miRNA 0.45 1 30167435 30167525

Neighbor

gene id symbol gene type direction distance location
XLOC_036529 dre-mir-24-3 coding downstream 4802 30162492 ~ 30162633 (-)
XLOC_036527 ercc6l2 coding downstream 236614 29898715 ~ 29930821 (-)
XLOC_036526 NA coding downstream 312418 29853229 ~ 29855017 (-)
XLOC_036525 slc20a2 coding downstream 315729 29770098 ~ 29851706 (-)
XLOC_036524 si:ch211-103n10.5 coding downstream 448042 29718692 ~ 29719393 (-)
XLOC_036531 NA coding upstream 105 30167630 ~ 30167704 (-)
XLOC_036532 dock8 coding upstream 158377 30325902 ~ 30424182 (-)
XLOC_036533 gucd1 coding upstream 563103 30730628 ~ 30742233 (-)
XLOC_036534 p2rx7 coding upstream 590644 30758169 ~ 30779101 (-)
XLOC_036535 gstt1a coding upstream 619586 30787111 ~ 30791266 (-)
XLOC_036520 AL928845.1 non-coding downstream 469153 29688511 ~ 29698282 (-)
XLOC_036521 NA non-coding downstream 473485 29691710 ~ 29693950 (-)
XLOC_036517 AL807792.1 non-coding downstream 531512 29581495 ~ 29635923 (-)
XLOC_036536 NA non-coding upstream 752424 30919949 ~ 30921272 (-)
XLOC_036539 BX640472.1 non-coding upstream 832389 30999914 ~ 31000028 (-)
XLOC_036547 NA non-coding upstream 1260610 31428135 ~ 31432412 (-)
XLOC_036555 BX545917.5 non-coding upstream 2260054 32427579 ~ 32431477 (-)

Expression


Co-expression Network