XLOC_036967 (ankrd10b)


Basic Information

Item Value
gene id XLOC_036967
gene name ankrd10b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 8929764 ~ 8967936 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072775
aactgtgctgtgtgtgtttgtgaggtgAGCACGCCGTGCGTCTCGTCTCGCCTCCCCTTTGGAAGCGCTTTGTTTGGGCGGGTAGACATCGTGCAATCCACCATTTTTGTGAAGATTTCGGCTTCCACGCATTTCCAAAACGCGAGTGTCCGTGTCGTGCAGTGATGTCTGTGGGTCTGGAGTCTGGGTTTTCTAGCGAGGAGGTGCTGAATATTCGCTTCCCTCTCCACCGTGCGTGCAGGGATGGAGACATGGGCGCGCTCTGCACGCTCTTGCAGCGCGGCTCCGAGCAGCTCTCGGTCGAGGACTCTTTTTACGGCTGGACGCCTCTACACTGGGCTGCACACTTCGGCAAGCTGGAGTGTGTGGTGCGTCTAGTGCAGGTGGGATGTGGTGTGAACTCTATGACCTCTCGCTTTGCCCAGACGCCTGCTCATATTGCTGCCTTCGGGGGTCATCCTCAGTGCCTGCTCTGGCTGCTGCAGAATGGAGCTGATATAAACAGACAGGATTATGTTGGAGAAACCCCCCTCCACAAAGCGGCCCGTGCTGGCAGCACTGACTGCATTAACACCCTCCTGCTCCAGGGAGCAAAGACAGACATGAGGAACGCTAGTGGACTGCCCGCAGCTGACCTAGCCCATGCCCAGGGCTTTCAAGAGTGTGCCCAACTGCTCTTCAATGCCCAGAACCGGCAACTCAATCAGCTTAATGGATTCTCAACCAATGGCTCTGTGTGCTTTGGAGACCGCAAGCTAATCCAAGAACGGGGCGTCTTAAATGGAGTTCCCAGCCGAAAGAGGTCTCTTGATTGCATGGAGTCTAATCACATTAAAAAGGCCAGAACAGATGATCTCGGTTATCAGCCAATAAACGGGTCCAGTGGGGAAGAGCAGATGGAGAACATGCACATGGAGTTCGGGCCTGCACTGAATTCCACAGCAGGACTCTGCCATCCCATGCAGCACCTCAATGGGGGTGACCTGATGCGCGAGAACATAAATGGGAATTCATCCGAGGTTAAGAGTGGTGATCATATTGGGAATGAGGGGGTCTCCTCACATCTTGGTCTTTTTGACAGTGGCCTTCACTACGGGCACCATAACGGCTTTGGAGACACAGCTGAGAACATGGAGGACGCCAGCAGTCAGATAGAGCACCGCAAGTCAGTCAGTGTAGAGGAGCAGTACGACCACATCACCTTCGACACCATGCACATCTATCATGGGTGTTAGGATCGTCCTGTCCACACTTAACATGCCTTTATATGTCCATTAAGAATGTGCTGGATTGCTTTAAGTCCATGTGTTTTTGAAAGGGACAATGTAtttgtgttgttaaataaaaagtgcattttatgtatgcttttttttttgtatttttagtttGGGTCAGTCAGAAAATCATGGAACTTATGCATTATTTGATCCAATGTATTAAATGTGCCTACGAACtaattataattgtttaatgaCATCTCTTTCTTATGTAGTATTAAGAGCTGCTTATGATTAAAATGGTTGATCAGTTGACTGAA
>TCONS_00072776
GGGATGGAGACATGGGCGCGCTCTGCACGCTCTTGCAGCGCGGCTCCGAGCAGCTCTCGGTCGAGGACTCTTTTTACGGCTGGACGCCTCTACACTGGGCTGCACACTTCGGCAAGCTGGAGTGTGTGGTGCGTCTAGTGCAGGTGGGATGTGGTGTGAACTCTATGACCTCTCGCTTTGCCCAGACGCCTGCTCATATTGCTGCCTTCGGGGGTCATCCTCAGTGCCTGCTCTGGCTGCTGCAGAATGGAGCTGATATAAACAGACAGGATTATGTTGGAGAAACCCCCCTCCACAAAGCGGCCCGTGCTGGCAGCACTGACTGCATTAACACCCTCCTGCTCCAGGGAGCAAAGACAGAGTAAGTCTTCAATAACTGCTGCTCGCAGTAACTGTTTCTCTCTCTGTCCCTTACATCCATACAAATGCCCCGCTGGTGCTTTATTTAAGAAGCGCTCCATCAAAACACAGCTGTTGATCCTTACACATAACAAAGCTCTACTTTTCTTTTCTTCCACTATAAGACAATATGGGAACA
>TCONS_00075069
GGGATGGAGACATGGGCGCGCTCTGCACGCTCTTGCAGCGCGGCTCCGAGCAGCTCTCGGTCGAGGACTCTTTTTACGGCTGGACGCCTCTACACTGGGCTGCACACTTCGGCAAGCTGGAGTGTGTGGTGCGTCTAGTGCAGGTGGGATGTGGTGTGAACTCTATGACCTCTCGCTTTGCCCAGACGCCTGCTCATATTGCTGCCTTCGGGGGTCATCCTCAGTGCCTGCTCTGGCTGCTGCAGAATGGAGCTGATATAAACAGACAGGATTATGTTGGAGAAACCCCCCTCCACAAAGCGGCCCGTGCTGGCAGCACTGACTGCATTAACACCCTCCTGCTCCAGGGAGCAAAGACAGACATGAGGAACGCTAGTGGACTGCCCGCAGCTGACCTAGCCCATGCCCAGGGCTTTCAAGAGTGTGCCCAACTGCTCTTCAATGCCCAGAACCGGCAACTCAATCAGCTTAATGGATTCTCAACCAATGGCTCTGTGTGCTTTGGAGACCGCAAGCTAATCCAAGAACGGGGCGTCTTAAATGGAGTTCCCAGCCGAAAGAGGTCTCTTGATTGCATGGAGTCTAATCACATTAAAAAGGCCAGAACAGATGATCTCGGTTATCAGCCAATAAACGGGTCCAGTGGGGAAGAGCAGATGGAGAACATGCACATGGAGTTCGGGCCTGCACTGAATTCCACAGGTGGGAACAGACCTTTAAATGGATCCTTGCCCTTGCCGTCCAATGGCTACTGCAGTCCAGAACAGGACAGGGGGGTCCAAATGGAGAGCTCATCCTCTCCAGTCCACAAAGAGCTGGAGATCTTCAACGTGACCTCCATGCAGATACCATGCCGTTGCACTAACT
>TCONS_00072777
GATTATGTTGGAGAAACCCCCCTCCACAAAGCGGCCCGTGCTGGCAGCACTGACTGCATTAACACCCTCCTGCTCCAGGGAGCAAAGACAGACATGAGGAACGCTAGTGGACTGCCCGCAGCTGACCTAGCCCATGCCCAGGGCTTTCAAGAGTGTGCCCAACTGCTCTTCAATGCCCAGAACCGGCAACTCAATCAGCTTAATGGATTCTCAACCAATGGCTCTGTGTGCTTTGGAGACCGCAAGCTAATCCAAGAACGGGGCGTCTTAAATGGAGTTCCCAGCCGAAAGAGGTCTCTTGATTGCATGGAGTCTAATCACATTAAAAAGGCCAGAACAGATGATCTCGGTTATCAGCCAATAAACGGGTCCAGTGGGGAAGAGCAGATGGAGAACATGCACATGGAGTTCGGGCCTGCACTGAATTCCACAGGTGGGAACAGACCTTTAAATGGATCCTTGCCCTTGCCGTCCAATGGCTACTGCAGTCCAGAACAGGACAGGGGGGTCCAAATGGAGAGCTCATCCTCTCCAGTCCACAAAGAGCTGGAGATCTTCAACGTGACCTCCATGCAGATACCATGCCGTTGCACTAACT
>TCONS_00072778
GATTATGTTGGAGAAACCCCCCTCCACAAAGCGGCCCGTGCTGGCAGCACTGACTGCATTAACACCCTCCTGCTCCAGGGAGCAAAGACAGACATGAGGAACGCTAGTGGACTGCCCGCAGCTGACCTAGCCCATGCCCAGGGCTTTCAAGAGTGTGCCCAACTGCTCTTCAATGCCCAGAACCGGCAACTCAATCAGCTTAATGGATTCTCAACCAATGGCTCTGTGTGCTTTGGAGACCGCAAGCTAATCCAAGAACGGGGCGTCTTAAATGGAGTTCCCAGCCGAAAGAGGTCTCTTGATTGCATGGAGTCTAATCACATTAAAAAGGCCAGAACAGATGCAGGACTCTGCCATCCCATGCAGCACCTCAATGGGGGTGACCTGATGCGCGAGAACATAAATGGGAATTCATCCGAGGTTAAGAGTGGTGATCATATTGGGAATGAGGGGGTCTCCTCACATCTTGGTCTTTTTGACAGTGGCCTTCACTACGGGCACCATAACGGCTTTGGAGACACAGCTGAGAACATGGAGGACGCCAGCAGTCAGATAGAGCACCGCAAGTCAGTCAGTGTAGAGGAGCAGTACGACCACATCACCTTCGACACCATGCACATCTATCATGGGTGTTAGGATCGTCCTGTCCACACTTAACATGCCTTTATATGTCCATTAAGAATGTGCTGGATTGCTTTAAGTCCATGTGTTTTTGAAAGGGACAATGTAtttgtgttgttaaataaaaagtgcattttatgtatgcttttttttttgtatttttagtttGGGTCAGTCAGAAAATCATGGAACTTATGCATTATTTGATCCAATGTATT
>TCONS_00072779
GTTCTTTTATGAATCATCTGTCACCTTTGTCCTTATGAAAGTGGCATGATGACAAAAGAAATGgagattgcattttttttgttaactGTTACGGCACAAATTCTAGAGAACATCTACACGTCTCAATGTTTTGCAGCTATTGAATTCGAAATGACTTGACTTTTTCAAGTAATCCTAGAAAAGGGGGAGAGCATTCCAAATAGACACTGCTGACTCACTCCAAGTTCCCTCAACGAAACTGCACTGTTGTGGCTTTAGGAGTGTTCTCACTATCGCTCCCTTCAGTATCAACACACTGGCAAACTGTTGAGCATGAGGAACGCTAGTGGACTGCCCGCAGCTGACCTAGCCCATGCCCAGGGCTTTCAAGAGTGTGCCCAACTGCTCTTCAATGCCCAGAACCGGCAACTCAATCAGCTTAATGGATTCTCAACCAATGGCTCTGTGTGCTTTGGAGACCGCAAGCTAATCCAAGAACGGGGCGTCTTAAATGGAGTTCCCAGCCGAAAGAGGTCTCTTGATTGCATGGAGTCTAATCACATTAAAAAGGCCAGAACAGATGATCTCGGTTATCAGCCAATAAACGGGTCCAGTGGGGAAGAGCAGATGGAGAACATGCACATGGAGTTCGGGCCTGCACTGAATTCCACAGGTGGGAACAGACCTTTAAATGGATCCTTGCCCTTGCCGTCCAATGGCTACTGCAGTCCAGAACAGGACAGGGGGGTCCAAATGGAGAGCTCATCCTCTCCAGTCCACAAAGAGCTGGAGATCTTCAACGTGACCTCCATGCAGATACCATGCCGTTGCACTAACT

Function

symbol description
ankrd10b Orthologous to human ANKRD10 (ankyrin repeat domain 10).

GO:

id name namespace
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-061013-49 Orthologous to human ANKRD10 (ankyrin repeat domain 10).

Ensembl:

ensembl_id ENSDARG00000004771

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072775 False 1537 mRNA 0.50 6 8929764 8967936
TCONS_00072776 False 538 lncRNA 0.53 3 8930004 8942526
TCONS_00075069 False 867 lncRNA 0.55 5 8930004 8965130
TCONS_00072777 False 598 lncRNA 0.53 3 8942258 8965130
TCONS_00072778 False 839 mRNA 0.47 3 8942258 8967837
TCONS_00072779 True 817 lncRNA 0.47 3 8953793 8965130

Neighbor

gene id symbol gene type direction distance location
XLOC_036966 naxd coding upstream 6293 8894788 ~ 8923471 (+)
XLOC_036965 NA coding upstream 43943 8884235 ~ 8885821 (+)
XLOC_036964 col4a2 coding upstream 46863 8761099 ~ 8882901 (+)
XLOC_036963 NA coding upstream 198399 8730515 ~ 8731365 (+)
XLOC_036962 NA coding upstream 234550 8693993 ~ 8695214 (+)
XLOC_036968 ube2al coding downstream 766 8968702 ~ 8972763 (+)
XLOC_036969 sik1 coding downstream 144223 9112159 ~ 9122562 (+)
XLOC_036970 si:ch211-214p13.8 coding downstream 327492 9295428 ~ 9303359 (+)
XLOC_036971 AL954142.1 coding downstream 403566 9371502 ~ 9392231 (+)
XLOC_036972 AL954142.3 coding downstream 409927 9377863 ~ 9377978 (+)
XLOC_036954 NA non-coding upstream 575697 8353798 ~ 8354067 (+)
XLOC_036953 NA non-coding upstream 765912 8160458 ~ 8163852 (+)
XLOC_036976 NA non-coding downstream 925170 9893106 ~ 9896957 (+)
XLOC_036979 NA non-coding downstream 1188042 10155978 ~ 10157547 (+)
XLOC_036980 BX936345.1 non-coding downstream 1375928 10343864 ~ 10343980 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G90679 NA non-coding NC_047599.1 CM018545.1 29404201 ~ 29406750 (-)