AMCG00014110


Basic Information

Item Value
gene id AMCG00014110
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1906150 ~ 1915590 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00014110
ATGGCCGCTCGACATGTCACTCAAGCGCGGGGCAGCGTCTGCCCGCAGACAGCCATCCTCCGCGCCGGGCTGCAGGGCACTGAGGCGGCCGCTGTCGGGCTCGTCTGCGCGGCTGTGCGTGGGCACCGGTTGGGGACGGACAGCGCGCCTGTGTCGGGGCAGCGGCCGAGCTCCAGAGCCCCGCACCGCCCGCACCGTCTCCGCGCCTCGGCAGCCTCAGCCCCCCGCCCGGCCATGCAGCAGCCGCGGGACAGGGCCCGGCCCGACGAGGCCACGGTGGACGTGCACTTCGCCGCCCTGCCCGACGCGCTGATCGCCTGCAGGGTGGCCGAGCCGGTGTTCGCGGACCCGCGGGTCAAGCTCGTGCGTGAGGCCGTGTCACGTGACTGCACTGAGGGCGTCTCGCCGGGCCTGTGCACCAGCCACTGCTGTCGGCggggtccagtccagtccactgcTCTGAGCCCTACAGCCCAGTCCAGTGAGGTCCAAGGCCCCGGCCCCTGGCTCAGTGTGTCCAGCCAGTGGaaaatgctgctgctgcaggccGGGCCCTGTGACTCACTGAGGAATGTGGCCCGCGGAGCCCCGGGGACGCTGAGCTCCAAAGGCCCGGACCGGAGCCGCGTCTGCGCACACGGCTGGGCTGTGGACAGAGCAGTAGTCCAGGTTCTCGGGGTCGAGTCGTCGGAGTCGATCACGCTGGGGAAACCGCGAACGCCCCCCGTCCGCCCTCGGCACCCGCCCTTGCGACCCCTGACCTCCGAGGCTCTGAAGCGGATTGGCCGCTGCCTCCTTAGAGATCCCAGCATGCACCTGAAGAGGATGAAGTGCAACCCCTTCTCCCTGATCGCCTCACTGGGGGACCAGGATGTCTTCTCCCGGACAGAGACGCGGgAGAGTTTTGAGGCCCTGTTCCGCTCCTTCGATGGCGCCGCGTCATTCCAGTTCTTCAAGAGCTTCCGTCGGGTCCGCATCAACTTCCAGGACACGGTGGCGGCGGCCGAGGCCCGGGTGCGGCTCCACAAGTCCGACTTCAATGGCAAAGAGCTGCGGCTGTATTTCGCGCAGGTAGGAGAGAAGTATGAGCTGCACGCCggcacccccaccacccccagcGTGGTGGTGCACGTGTGCGAGAGCGAGCAGGACAGCTCGGGGGGGGAGGAGGACGAGGCCCGGCCGCGCCCCCGCATCATCCAGACGCGCCGCCCCGAGTACGCCGGCCCCGCCCAGCACTGAGCTCCCCGCTGCGCCGCCCCCCCGCTGACACTGCTCTGAGGACAGGCCTGATCGCCCTGGTGTCCCGGTTGGGCTCTGGTTCTGTTGGACTCGATACTGAGAGCAGGAGGACGGACCGCTGAGTTGCTTGCATTTGTccttttggttgtttttggcGTCCGTCCGGGGGAGCGTGCGATCGGGAGAGAGGACGACGGGAgctgcgtgagtgtgtgtgtgagagtgtgttatTTATACCAGGACTCTGACTGTTATCCAGTCTAAATCACTGTGTCCCAGAGAAGCCCCTGAGCGGTGGCATCACCGGCGCCCGTCTTTCCGCGTTGCCGGCCACGGCCCGCTGCCTGCTGGACGAACGAGCCGTGCGGTTCAGGAGGCGGTCAAACCAAAGACCACCGGGGCGCCAAGCCGGGCCGCGGCTCCGCACTCTGGACCCGTGAGACGCCGTTCACGACGGCGGGAAGCGCGTGGTCCGGATTCAGACGGGTGAGGAGCTGCCACggctggtgggggggtgcagtCGCTCCCGGCCACGATGTAGCAGCGCTGTgtctcacacactgactgttcACGTGTAGCACTGTGGGCAACGCCTGAGGCCCCTCACTCCTTCTCACTGTGCGCGTCTCTGTAGCAGCAGggtctgtgtgcgtctgcgtgtctgtgtgcgcaTTTGTGTGTCTGCCACTCGTCCGAGACGCCGGATTGGCCGCACTGCCCTGCTCAGGTGAGTGAAGCCCCCACTGGACTCACCGTCCGCTGTCCTGCAGGTGTCCTCTCCCCCCCACAGCCCTGACCCTCCCCGTGTCTGGGGGCCGCAGCCCGGGGCCCCCTGCTGTCCGAGCGCATGTCTGTCCTGGAACTCGGTCATATCTGTTACTGCGTACTGTTCACCATCGTCGATCTTGTGActgtaatcattattataaataatactgttgatgatacaaataataataataaaagattgtTAACCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00014110 True 2221 mRNA 0.66 7 1906150 1915590

Neighbor

gene id symbol gene type direction distance location
AMCG00014107 NA coding downstream 2417 1903416 ~ 1903733 (-)
AMCG00014109 NA coding downstream 7241 1895665 ~ 1898909 (-)
AMCG00014097 NA coding downstream 367945 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 451533 1453775 ~ 1454617 (-)
AMCG00014091 NA coding downstream 493303 1391356 ~ 1412847 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 114000 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 116651 2032241 ~ 2032429 (-)
AMCG00014114 son,LOC107709257,LOC107698212 coding upstream 117122 2032712 ~ 2037821 (-)
AMCG00014116 NA coding upstream 122880 2038470 ~ 2046247 (-)
AMCG00014118 NA coding upstream 236295 2151885 ~ 2154746 (-)
G67818 NA non-coding downstream 84391 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 808171 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 1034523 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1404365 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1519209 386733 ~ 386941 (-)
G67849 NA non-coding upstream 26437 1942027 ~ 1942420 (-)
G67881 NA non-coding upstream 141259 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 434535 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 692679 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 781218 2696808 ~ 2701159 (-)
G67832 NA other downstream 3535 1900640 ~ 1902615 (-)
G67835 NA other downstream 13597 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 20718 1879203 ~ 1885432 (-)
AMCG00014105 gabpa,LOC106586689 other downstream 32728 1869850 ~ 1873422 (-)
G67824 LOC103352860 other downstream 42457 1859542 ~ 1863693 (-)
G67843 NA other upstream 1137 1916727 ~ 1918182 (-)
AMCG00014119 NA other upstream 170351 2085941 ~ 2124953 (-)
AMCG00014134 NA other upstream 616364 2531954 ~ 2542697 (-)
AMCG00014144 NA other upstream 725469 2641059 ~ 2653247 (-)
G68088 NA other upstream 909972 2825562 ~ 2829144 (-)

Expression


Co-expression Network