G67849


Basic Information

Item Value
gene id G67849
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 1942027 ~ 1942420 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU84744
GGTCTTTGTTACTGGGGGCAGGGGGCCGGCAGAGCATCGCCTGCCATAGCAGCACCGACTCGGAAGGCAGGGCACTGCTCTCTCAGGAGGAGAGGACGCTGCAcgtgtgtgtgatttgtaaccccccagctcagcacagagTGCGCTGTGATTGCAGCAGAGGACATCACAGCCTGCCACAGGGCCAGGGAGCCACACAGCCCGTCTCCTAACCAGCATCAACACAACACTGTGAACATCTGGACACACCTGTACAATCTGTGGAGTTAGTCAATGCATTCTCTTGTCCAACACTTCTTTCATCTTATATTTCCTGTACTGCGTCTGTAAGTACTTTGGCAAGACTTCTGTAAAGTTGTCGTgtcaataaagcttgttttgaatttgatttgaa

Function

GO: NA

KEGG:

id description
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU84744 True 394 lncRNA 0.51 1 1942027 1942420

Neighbor

gene id symbol gene type direction distance location
AMCG00014110 NA coding downstream 26437 1906150 ~ 1915590 (-)
AMCG00014107 NA coding downstream 38294 1903416 ~ 1903733 (-)
AMCG00014109 NA coding downstream 43118 1895665 ~ 1898909 (-)
AMCG00014097 NA coding downstream 403822 1537057 ~ 1538205 (-)
AMCG00014090 NA coding downstream 487410 1453775 ~ 1454617 (-)
AMCG00014115 son,LOC565999,LOC107698912,LOC107555269,LOC107709257,LOC107698212 coding upstream 87170 2029590 ~ 2031527 (-)
AMCG00014117 NA coding upstream 89821 2032241 ~ 2032429 (-)
AMCG00014114 son,LOC107709257,LOC107698212 coding upstream 90292 2032712 ~ 2037821 (-)
AMCG00014116 NA coding upstream 96050 2038470 ~ 2046247 (-)
AMCG00014118 NA coding upstream 209465 2151885 ~ 2154746 (-)
G67818 NA non-coding downstream 120268 1820612 ~ 1821759 (-)
G67691 NA non-coding downstream 844048 1097656 ~ 1097979 (-)
G67686 NA non-coding downstream 1070400 871053 ~ 871627 (-)
G67658 NA non-coding downstream 1440242 500007 ~ 501785 (-)
G67646 NA non-coding downstream 1555086 386733 ~ 386941 (-)
G67881 NA non-coding upstream 114429 2056849 ~ 2059491 (-)
G67911 NA non-coding upstream 407705 2350125 ~ 2373329 (-)
G67953 NA non-coding upstream 665849 2608269 ~ 2608479 (-)
G68057 NA non-coding upstream 754388 2696808 ~ 2701159 (-)
G68061 NA non-coding upstream 765397 2707817 ~ 2710329 (-)
G67843 NA other downstream 23845 1916727 ~ 1918182 (-)
G67832 NA other downstream 39412 1900640 ~ 1902615 (-)
G67835 NA other downstream 49474 1892063 ~ 1892553 (-)
AMCG00014108 NA other downstream 56595 1879203 ~ 1885432 (-)
AMCG00014105 gabpa,LOC106586689 other downstream 68605 1869850 ~ 1873422 (-)
AMCG00014119 NA other upstream 143521 2085941 ~ 2124953 (-)
AMCG00014134 NA other upstream 589534 2531954 ~ 2542697 (-)
AMCG00014144 NA other upstream 698639 2641059 ~ 2653247 (-)
G68088 NA other upstream 883142 2825562 ~ 2829144 (-)
AMCG00014181 ppef1,LOC105893339,LOC108425737,LOC107695075 other upstream 1443337 3385757 ~ 3394754 (-)

Expression


Co-expression Network